# Tools

> Every listed resource, editors’ picks first. The filters below can be combined.

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Resources for ML / AI or Data engineering or Research / Academia: 402 items.

> - ML / AI: Model training, evaluation and LLM application development.
> - Data engineering: Data pipelines, warehouse modeling, ETL and data quality.
> - Research / Academia: Literature search and reviews, experimental data analysis, paper writing and submission.

- [Gemini API Dev](https://hebbmind.com/de/skill/gemini-api-dev.md): [Skill] Teaches agents to code against the latest Gemini API and Python/TypeScript SDKs: multi-turn chat, function calling, structured output, and image and speech generation, while avoiding deprecated older models. Maintained by Google's Gemini team.
- [Gemini Skills](https://hebbmind.com/de/skill/gemini-skills.md): [Skill] Gemini API development skills: gemini-api-dev (core API and SDKs), gemini-live-api-dev (real-time bidirectional audio/video streaming) and gemini-omni-flash-api (Omni video generation and editing), filling in APIs released after model training cutoffs. Maintained by Google's Gemini team.
- [Jupyter Book](https://hebbmind.com/de/cli/jupyter-book.md): [CLI] Builds Markdown and Jupyter notebooks into online textbook sites with a TOC, math, citations and cross-references, plus publication-quality PDF export; popular for course notes. A Jupyter subproject installed via pipx or npm; PDF export needs Typst or LaTeX.
- [Hugging Face CLI](https://hebbmind.com/de/cli/huggingface-hub.md): [CLI] Hugging Face's official hf CLI: search, download and upload models and datasets, manage repos and storage buckets, and run jobs on Hugging Face's cloud. Output adapts automatically for agents, and hf skills add installs companion skills. Uploads and similar actions need a login.
- [NVIDIA Agent Skills](https://hebbmind.com/de/skill/nvidia-skills.md): [Skill] NVIDIA's official, verified catalog of hundreds of skills covering CUDA-X libraries, NeMo training, NIM and Dynamo inference, RAG blueprints, Jetson, Omniverse and robotics simulation. The install adds only nvidia-skill-finder, which recommends other skills and installs them once you confirm.
- [NVIDIA Agent Skills](https://hebbmind.com/de/plugin/nvidia-skills.md): [Plugin] NVIDIA's official plugin that finds and installs the right skills from NVIDIA's catalog for your task, spanning CUDA acceleration, NIM inference, NeMo training, RAG blueprints, Omniverse simulation and robotics. Listed in both the Claude and Codex official marketplaces.
- [qsv](https://hebbmind.com/de/cli/qsv.md): [CLI] Fast Rust toolkit for tabular data with nearly 80 subcommands for querying, stats, cleaning, validation, joins and format conversion on CSV and Excel. Also offers an MCP server and a Claude Cowork plugin.
- [Obsidian Visual Skills Pack](https://hebbmind.com/de/plugin/axton-obsidian-visual-skills.md): [Plugin] Visualization skills for Obsidian that turn text into Excalidraw hand-drawn diagrams, Mermaid charts and Obsidian Canvas mind maps. Marked experimental by the author; the Excalidraw skill needs the matching Obsidian plugin.
- [Research Writing Assistant](https://hebbmind.com/de/skill/research-writing-skill.md): [Skill] Thesis workflow for undergrad and grad students: Q&A to settle topic and outline, then chapter drafting, literature reviews, pre-submission self-review and AI-tone polishing, with modules for law, medicine and social sciences. Outputs Markdown or compilable LaTeX; won't fabricate citations.
- [Ars Contexta](https://hebbmind.com/de/plugin/arscontexta.md): [Plugin] Learns your domain and working style over a few rounds of conversation, then generates a personalized Markdown knowledge system (folders, note templates, processing pipelines, hooks and maps) so agents remember knowledge across sessions. First setup takes about 20 minutes and is token-heavy.
- [Agent Toolkit for AWS](https://hebbmind.com/de/plugin/agent-toolkit-for-aws.md): [Plugin] AWS's generally available agent toolkit and plugin marketplace: plugins such as aws-core, aws-agents and aws-data-analytics bundle the AWS MCP Server with evaluated skills for IaC, serverless, containers and billing. Calling AWS APIs requires configured credentials.
- [GeoAI MCP Server](https://hebbmind.com/de/mcp/geoai-mcp-server.md): [MCP] MCP server from the opengeos GeoAI project: segment buildings, roads and vegetation in satellite imagery from text prompts, detect vehicles and ships, spot changes between images, estimate canopy height and fetch NAIP, Sentinel-2 and Landsat imagery. Install from the repo (Python 3.10+).
- [Postgres MCP Pro](https://hebbmind.com/de/mcp/postgres-mcp.md): [MCP] PostgreSQL MCP server with database health checks, index tuning, EXPLAIN plan analysis and hypothetical index simulation, plus safe read-only SQL execution in restricted mode.
- [Science Skills](https://hebbmind.com/de/skill/science-skills.md): [Skill] About 40 research skills from Google DeepMind: search arXiv, PubMed and OpenAlex, query UniProt, PDB, ClinVar, ChEMBL and more, run AlphaGenome variant analysis and render structures in PyMOL. Requires uv; AlphaGenome needs an API key, and keys raise limits for OpenAlex, ClinVar and others.
- [Cloudflare Agents SDK](https://hebbmind.com/de/skill/agents-sdk.md): [Skill] Teaches agents to build, debug and review stateful AI agents with the Cloudflare Agents SDK: state sync, scheduled tasks, RPC, MCP servers, email and streaming chat, checking the latest official docs first. Maintained by Cloudflare.
- [SQLMesh](https://hebbmind.com/de/cli/sqlmesh.md): [CLI] Framework for writing data transformation models in SQL or Python, with a Terraform-like plan/apply flow, virtual data environments, unit tests and table diffs, and transpilation across 10+ SQL dialects. A Linux Foundation project and an alternative to dbt.
- [Pix2Text](https://hebbmind.com/de/cli/pix2text.md): [CLI] Recognizes images or whole PDFs (including scans) with math formulas and tables into Markdown and LaTeX, strong on English and Chinese and supporting 80+ languages, handy for digitizing exams, lecture notes and study notes. An open-source Mathpix alternative that runs locally with Python.
- [arXiv MCP Server](https://hebbmind.com/de/mcp/arxiv-mcp-server.md): [MCP] Search and download arXiv papers and read the authors' LaTeX source section by section, export BibTeX and follow topic updates, with papers cached locally. No API key needed.
- [Microsoft Agent Skills](https://hebbmind.com/de/skill/microsoft-skills.md): [Skill] Microsoft's official skill collection: 170+ skills focused on Azure SDKs (Python, .NET, TypeScript, Java, Rust) and Microsoft Foundry development, plus plugins, custom agents and MCP configs. Microsoft recommends picking skills per project rather than installing them all.
- [PDFMathTranslate-next](https://hebbmind.com/de/cli/pdfmathtranslate-next.md): [CLI] PDFMathTranslate 2.x (command pdf2zh_next), built on BabelDOC: translates papers and other PDFs while keeping formulas, charts, TOC and annotations, outputting translated and bilingual side-by-side versions. Uses a free translation channel by default, or your own OpenAI, DeepSeek or other API key.
- [OpenClaw Medical Skills](https://hebbmind.com/de/skill/openclaw-medical-skills.md): [Skill] 869 medical skills compiled by FreedomIntelligence from a dozen open-source libraries: SOAP notes, discharge summaries, drug interactions, clinical guidelines, PubMed/FDA lookups, genomics and device regulation. Made for OpenClaw, usable elsewhere; some need API keys. Doctors must review output.
- [Paper Search MCP](https://hebbmind.com/de/mcp/paper-search-mcp.md): [MCP] Unified search across 20+ academic sources including arXiv, PubMed, bioRxiv, Semantic Scholar and OpenAlex, returning deduplicated, normalized results and downloading full text via open-access channels first. Most sources need no API key.
- [Rebiber](https://hebbmind.com/de/cli/rebiber.md): [CLI] Replaces arXiv preprint entries in your .bib file with the official published versions from DBLP and ACL Anthology, keeping citation keys, to tidy references before camera-ready. Overwrites the file by default, so preview with --dry-run. Mainly covers CS venues; needs Python 3.10+.
- [Supabase Postgres Best Practices](https://hebbmind.com/de/skill/supabase-postgres-best-practices.md): [Skill] Postgres rules ranked by impact: query optimization, indexing, connection pooling, RLS security, schema design and lock troubleshooting, with wrong-vs-right SQL examples, applicable to any Postgres. Maintained by Supabase.
- [Markdownify MCP Server](https://hebbmind.com/de/mcp/markdownify-mcp.md): [MCP] Converts PDF, Word, Excel, PowerPoint, images, audio, web pages and YouTube transcripts into Markdown that agents can read and cite. Built on Microsoft MarkItDown; the Docker image lacks audio transcription and image recognition, so build locally for full features.
- [Rill](https://hebbmind.com/de/cli/rill.md): [CLI] Open-source, agent-friendly BI: define metrics and dashboards in YAML and SQL, and rill init generates project instructions and MCP config for Claude Code so agents can build business dashboards and answer questions in natural language. Local use is free; publishing to Rill Cloud needs an account.
- [Korean Law MCP](https://hebbmind.com/de/mcp/korean-law-mcp.md): [MCP] Searches Korean statutes, case law, administrative rules and local ordinances via the Korean Ministry of Government Legislation's Open API, verifies whether cited provisions and cases exist, and compares versions over time. Needs a free API key and Node.js; have a lawyer review results.
- [Bright Data MCP](https://hebbmind.com/de/mcp/brightdata-mcp.md): [MCP] Bright Data's official MCP: web search (Google, Bing, Yandex), any page to Markdown, structured data extraction from e-commerce, social and other platforms, and remote browser control. Needs an API token; includes 5,000 free requests a month.
- [Perplexity API Platform MCP Server](https://hebbmind.com/de/mcp/modelcontextprotocol.md): [MCP] Perplexity's official MCP with four tools: web search, grounded Q&A, deep research and reasoning, available remotely or run locally. Requires a Perplexity API key.
- [MFLUX](https://hebbmind.com/de/cli/mflux.md): [CLI] Runs open image models like FLUX, Qwen Image and Z-Image locally on a Mac: text-to-image, reference-based edits, inpainting and upscaling, all on-device. Needs Apple Silicon and uv; the first run downloads models and is slow. Check each model's license before commercial use.
- [Claude Scientific Writer](https://hebbmind.com/de/plugin/claude-scientific-writer.md): [Plugin] A research-writing plugin from K-Dense: searches the literature in real time before drafting, then produces papers, reviews, grant proposals, posters and slides with verifiable citations and figures. Literature search needs a Parallel API key; PDF output needs LaTeX.
- [Deep Research Skills](https://hebbmind.com/de/skill/deep-research-skills.md): [Skill] Two-stage deep research: drafts an editable outline for the topic, then parallel subagents search the web item by item and compile a Markdown report. Good for literature reviews, competitor research and due diligence. Install by copying files per the README, plus pip install pyyaml.
- [Tavily MCP Server](https://hebbmind.com/de/mcp/tavily-mcp.md): [MCP] Four tools for real-time web search, page content extraction, site mapping and full-site crawling, available as a remote server or run locally. Maintained by Tavily; needs an API key or OAuth sign-in, and a free account is available.
- [PaperBanana](https://hebbmind.com/de/mcp/paperbanana.md): [MCP] Turns a paper's method description (text or PDF) or data files into publication-ready diagrams and plots, with several AI reviewer roles refining each figure. Needs an OpenAI or Gemini API key (billed per image), Python and uv. A community reimplementation, not by the original paper's authors.
- [Rainman Translate Book](https://hebbmind.com/de/skill/translate-book.md): [Skill] Translates entire books: splits PDF, DOCX or EPUB into chunks for parallel subagents, keeps terminology consistent, resumes interrupted runs and verifies with hashes, then outputs HTML, DOCX, EPUB or PDF. Needs Calibre, Pandoc and Python.
- [MiniMax CLI (mmx)](https://hebbmind.com/de/cli/minimax-ai-cli.md): [CLI] MiniMax's official CLI, built for agents: chat with MiniMax models from the terminal and generate images, video and speech, plus speech transcription, image understanding and web search. Works with the international platform. Requires a MiniMax Token Plan subscription.
- [sqlite-utils](https://hebbmind.com/de/cli/sqlite-utils.md): [CLI] A CLI and Python library by Simon Willison: imports JSON and CSV straight into SQLite with automatic table creation, runs in-memory SQL queries over files, and supports full-text search and table transformations.
- [MCP Memory Service](https://hebbmind.com/de/mcp/mcp-memory-service.md): [MCP] Self-hostable long-term memory for agents, offering MCP, a REST API and a web dashboard: semantic search, knowledge graph and automatic memory consolidation. Embeddings are computed locally; choose SQLite, Cloudflare or Milvus as the backend.
- [Medical Research Agent Skills](https://hebbmind.com/de/skill/medical-research-skills.md): [Skill] 550+ medical research skills from AIPOCH: PubMed search strategy, study design and sample size, statistics and bioinformatics, journal writing and reviewer responses, all vetted by MedSkillAudit. Some need Python/R or database credentials; have researchers and clinicians review results.
- [Math Modeling Skill](https://hebbmind.com/de/skill/math-modeling-skill.md): [Skill] A three-stage workflow for math modeling contests like MCM/ICM and CUMCM: analysis, solving and plotting in Python or MATLAB, and a Word (optionally LaTeX) paper, with stage-check subagents and OpenAlex plus AnySearch literature search. Generated papers are for reference only.
- [Open-WebSearch](https://hebbmind.com/de/mcp/open-websearch.md): [MCP] Multi-engine web search MCP with no API key, supporting Bing, DuckDuckGo, Brave, Baidu, Sogou, CSDN, Juejin and more; also fetches page content, CSDN articles and GitHub READMEs. Ships a CLI and a local server too.
- [MATLAB MCP Server](https://hebbmind.com/de/mcp/matlab-mcp-core-server.md): [MCP] MathWorks' official server that lets agents start your local MATLAB, write and run scripts and unit tests, and check code style and potential errors, for computing, simulation and data analysis. Needs a licensed MATLAB R2021a+ and the downloaded server binary.
- [evil-read-arxiv](https://hebbmind.com/de/skill/evil-read-arxiv.md): [Skill] Recommends daily papers from arXiv and Semantic Scholar by research interest, reads them and writes illustrated Obsidian notes and a paper graph; can also search venues like CVPR and NeurIPS. Needs Python 3, Obsidian, a vault path and an interests config; the web app needs an Anthropic API key.
- [Papis](https://hebbmind.com/de/cli/papis.md): [CLI] Command-line reference and bibliography manager: add papers by DOI with metadata fetched automatically, search by author, title or tag, and import or export BibTeX. Each entry is a readable YAML file that agents can read and write easily; a web UI is included. Needs Python.
- [ToolUniverse](https://hebbmind.com/de/mcp/tooluniverse.md): [MCP] From Harvard Medical School's Zitnik Lab: one MCP connecting 1,000+ scientific tools and databases for drugs and targets, genes and proteins, clinical trials, FDA data and PubMed, for biomedical and drug research. Runs with uv; some sources need API keys; medical conclusions need expert review.
- [MCPVault](https://hebbmind.com/de/mcp/mcpvault.md): [MCP] Lets agents read and write your local Obsidian vault directly: search notes, append to daily notes, tidy tags and properties, and summarize reading or research notes by topic. No need to open Obsidian or install plugins; access is limited to the vault and can be read-only. Needs Node.js 20+.
- [My Claude Code Setup (claude-code-my-workflow)](https://hebbmind.com/de/skill/claude-code-my-workflow.md): [Skill] Econometrician Pedro Sant'Anna's academic Claude Code setup (fork the repo to use it): Beamer/Quarto lecture slides, paper review and mock refereeing, R/Python analysis and replication packages, with specialist subagents and quality gates. Needs Git and Python; slides need XeLaTeX and Quarto.
- [NotesMD CLI](https://hebbmind.com/de/cli/notesmd-cli.md): [CLI] Reads and writes Obsidian vaults from the terminal: search, view, create, edit, move and delete notes, and manage frontmatter and daily notes, without Obsidian running. Good for agents maintaining a personal knowledge base. Formerly Obsidian CLI.
- [DuckDuckGo Search MCP Server](https://hebbmind.com/de/mcp/duckduckgo-mcp-server.md): [MCP] Web search through DuckDuckGo plus fetching and parsing page content, with built-in rate limiting and LLM-friendly result formatting. No API key needed; runs with a single uvx command.
- [Brave Search MCP Server](https://hebbmind.com/de/mcp/brave-search-mcp-server.md): [MCP] Brings the Brave Search API to agents: web, news, image, video and local business and place search, plus LLM-ready page context and AI summaries. Maintained by Brave; needs an API key.

Next page: https://hebbmind.com/de/tools.md?page=6&profession=algorithm%2Cdata-engineering%2Cresearch
