Tools

A Zotero 7 plugin with a built-in MCP server: agents search your local library (title, author, tags, full text), read PDF full text, abstracts, notes and highlights, and create notes and tags. Needs Zotero desktop with the plugin enabled; semantic search needs OpenAI or Ollama embeddings.

The standard machine translation scorer: computes BLEU, chrF and TER with significance tests and downloads public test sets such as WMT, to compare engines or prompts. Needs Python 3.9+ and reference translations; automatic metrics are a rough screen, so final copy still needs human review.

Pre-submission review for CS conference papers (CVPR, ACL, NeurIPS and more): polish, translate or condense on request, or let AI reviewers raise issues and a jury rule on them. Only wording fixes are drafted, with your approval; missing experiments go back to you, never invented. Needs Node.js.

Plain-text spaced repetition: Q&A and cloze cards live in Markdown files, agents can draft decks from notes or textbooks and validate them with hashcards check, and hashcards drill runs FSRS reviews in your browser. Install with cargo or grab a macOS, Linux or Windows release.

Lets agents query Google Ads accounts, campaigns and performance data with GAQL; currently read-only tools only. Maintained by Google; needs Google Cloud credentials and Google Ads API access.

Connects agents to MongoDB and Atlas: query, aggregate, inspect collection schemas and indexes, and manage Atlas clusters, projects and database users. Maintained by MongoDB; needs a connection string or an Atlas service account; supports read-only mode.

Atlassian's official hosted remote MCP: access Jira, Confluence, JSM, Bitbucket, Loom and more with OAuth or an API token. Works with Atlassian Cloud sites only.

Connects the QGIS desktop GIS to Claude: create and save projects, load vector and raster layers, run Processing toolbox algorithms, export maps and execute PyQGIS code through chat. Needs QGIS 3 and uv; download the repo, copy the plugin into QGIS's plugin folder and start the server.

Turns ComfyUI workflows into MCP tools with no code, covering generation and conversion across text, image, speech and video; works with local ComfyUI or RunningHub in the cloud. Start the server with uvx pixelle and configure an LLM first.

Cleans up BibTeX bibliographies: normalizes field formatting and indentation, sorts entries, merges or removes duplicates and strips chosen fields, rewriting the .bib in place or printing to stdout; also works as a pre-commit hook. Needs Node.js.

A Pandoc filter that numbers figures, tables, equations and sections and builds cross-references, so numbering stays right when you write papers or reports in Markdown and convert to Word, PDF or HTML. Needs a matching Pandoc version; Homebrew on macOS installs a compatible Pandoc too.

Converts PDF, Word, PowerPoint, Excel, EPUB, web pages and images to clean Markdown locally, keeping page anchors, tables and two-column reading order, with full-text search across folders. Formerly pdf-reader-mcp; no uploads, no API key. Needs Node.js 18+; OCR for scans needs tesseract.

Checks spelling, grammar and formatting in LaTeX and Markdown sources (e.g. figures never referenced), mapping each issue back to the source line, with optional HTML reports. Grammar checks use LanguageTool and support English, German, French and more; Homebrew on macOS bundles Java.

ComfyUI's official CLI: install and launch ComfyUI in one step, manage custom nodes and model downloads, and run image and video workflows, with --json output on every command for agents. Can also submit jobs to paid Comfy Cloud.

Lets agents read and write Google Sheets: list and search spreadsheets, read and batch-update cells, insert rows and columns, create and share sheets and build charts, with the option to enable only some tools to save context. Needs a Google Cloud service account or OAuth credentials.

Graph database MCP server from Neo4j Labs: reads the graph schema and runs read and write Cypher queries, with read-only mode, query timeouts and response token limits. Needs a Neo4j instance with the APOC plugin enabled.

Turns Manim animations into step-through slide decks: mark slide breaks in scene code, render, then present with manim-slides or export to HTML, PDF or PPTX, for math and science classes and talks. Scenes are Python (agents can write them); needs Manim, plus LaTeX for formulas.

165 teaching skills grounded in learning-science research, covering course design, lesson planning, assessment, classroom questioning and student self-study coaching, for teachers and instructional designers. Install all at once as a Claude Code or Codex plugin, or copy them one by one.

100+ tools that let agents drive COMSOL Multiphysics: build models, set geometry and physics (heat transfer, fluids, electrostatics, solid mechanics), mesh, solve and export results; the accompanying paper is in Neurocomputing. Needs licensed COMSOL 5.x/6.x, Python and Java; install from the repo.

Plotting skills for academic papers: bar, line, scatter, radar and other styles distilled from 9 real paper figures. Plot your own data in a chosen style as 300 dpi figures, or reproduce a matplotlib script from a paper screenshot. Needs local Python and matplotlib.

Translates articles between Chinese and English or Chinese and Japanese (not English-Japanese) in four steps: analysis, draft, review and final, with options for target audience, style and glossary, aiming for natural-sounding output. No account or API key; URLs are fetched via r.jina.ai.

Answers macro questions with market data: combines 13 free sources including Polymarket and Kalshi prediction markets, US Treasury yields, CFTC positioning, SEC insider trades and A-share fund flows into probability estimates, reasoning and scenarios. No API key; needs uv. Not investment advice.

Jina AI's official remote MCP: converts web pages and PDFs to Markdown, searches the web, arXiv, SSRN and images, and offers screenshots, reranking and semantic dedup. Reading tools work without a key (rate-limited); search and rerank need a Jina API key.

Runs SQL queries against ClickHouse and browses databases and table schemas, read-only by default; can also enable embedded chDB to query data directly in files and URLs. Maintained by ClickHouse.