Tools

Parses PDF, DOCX, PPTX, XLSX, HTML, images and audio, recovering layout, reading order, tables and formulas, and exports Markdown, HTML or lossless JSON. Started by IBM Research, now hosted by the LF AI & Data Foundation; runs fully locally.

Fast regex search across directories (command rg) that respects .gitignore, skips hidden and binary files by default and filters by file type. A go-to command for coding agents searching a codebase.

Command-line toolkit for transcoding, cutting, joining, frame extraction and streaming of audio and video, including ffmpeg, ffprobe and ffplay. A core dependency for agents handling media. The GitHub repo is the official mirror.

Multi-agent simulated hedge fund: agents modeled on investors like Buffett and Munger work with quant and risk modules to analyze stocks, with backtesting. Good for teaching investment frameworks. Needs Financial Datasets and model API keys; no real trading, not investment advice.

Community-maintained simplified command help with example-first pages for common CLI tools, easier to read than man. Install an official client (Python, Rust or Node.js), then run tldr followed by a command name.

A cat replacement with syntax highlighting, line numbers and Git change markers, plus --line-range to print specific lines. Falls back to plain text in pipes and other non-interactive use, and pairs with git diff or tail -f for code and logs.

'rsync for cloud storage': sync and copy files across dozens of providers such as S3, Google Drive, OneDrive and Alibaba Cloud OSS, with encryption and mounting. Set up remotes with rclone config before use.

Creates a local CA with one command and issues development HTTPS certificates trusted by your system and browsers, for localhost, IPs and wildcard domains, with no extra configuration. Run mkcert -install once first to add the root certificate to the trust store.

Personalized tutoring system from HKU's HKUDS: build a knowledge base from textbooks for Q&A, step-by-step solutions and quizzes, for teachers and self-learners. The deeptutor command outputs JSON for agents like Claude Code. Needs Python 3.11+, Node.js 20+ and an LLM API key.

From HKU's Data Intelligence Lab: plugins or skills for Claude Code, Codex and other agents generate agent-callable CLIs for apps like GIMP, Blender and LibreOffice, and the cli-hub package manager finds and installs ready-made community CLIs. Needs Python 3.10+.

QGIS command-line wrapper from HKU's CLI-Anything project: create and edit .qgz projects, add GeoPackage layers and features, build print layouts and export PDF or images, and call QGIS processing algorithms, with JSON results. Needs QGIS desktop and a Python that can import PyQGIS.

Modern markup-based typesetting system, a LaTeX alternative for papers, reports and resumes. Fast incremental compilation; typst compile outputs a PDF in one command and watch mode recompiles automatically.

Unified database lookup skill from K-Dense's scientific collection: reproducibly queries about 80 public database APIs such as PubChem, UniProt, ChEMBL, ClinicalTrials.gov and FRED, returning traceable results with endpoints, parameters and count checks. Some need API keys.

Systematic literature reviews following PRISMA and similar standards: searches PubMed, arXiv, bioRxiv and other databases, verifies each citation's DOI, and outputs Markdown and PDF in APA, Nature or other styles. Main web search uses parallel-cli and needs a Parallel account.

Teaches agents standard single-cell RNA-seq analysis with Scanpy: QC, normalization, PCA/UMAP, clustering, differential expression and plots, with ready-to-run pipeline scripts and guidance on converting Seurat and other R objects to h5ad. Needs Python 3.12+; by K-Dense.

Guides agents to the right statistical method for research data: t-tests, ANOVA, chi-square, regression and Bayesian analysis, checking assumptions, computing effect sizes and power, and reporting results in APA format. Python-based (pingouin, statsmodels); by K-Dense.

Drafts, revises and reviews research manuscripts, tying every fact and number to verified evidence and covering reporting guidelines, authorship, AI disclosure and confidentiality; explicitly forbids fabricated citations or data. Includes offline check scripts; no API key needed.

End-to-end academic paper plugin: deep research and literature review, writing, multi-perspective simulated peer review, revision and finalization, pausing for your approval at each stage, with built-in citation verification and integrity checks. Licensed CC BY-NC.

Open-source crypto trading framework: download market data, backtest and optimize strategies, and paper trade from the CLI while agents iterate on strategies. Docker recommended; strategies need Python and live trading needs exchange API keys. Backtests don't guarantee returns.

Skill suite for the whole academic research workflow: deep research (including PRISMA systematic reviews), paper writing, multi-perspective peer review and revision, pausing for human approval at each stage, with citation and integrity checks. CC BY-NC, non-commercial only.

General-purpose AI agent that runs on your machine, with a desktop app, CLI and API. Written in Rust, works with 15+ model providers and connects to 70+ extensions via MCP. Originally from Block, now part of the Linux Foundation's AAIF.

Official Chrome plugin bundling the Chrome DevTools MCP with debugging skills for accessibility, LCP and memory leaks: lets agents drive and inspect a real Chrome and analyze network requests, console logs and performance traces. Collects usage stats by default; can be disabled.

Lets agents control and inspect a real Chrome: read the console and network requests, take screenshots, and record performance traces with optimization suggestions. Maintained by the Chrome DevTools team.

Teaches agents to use the Chrome DevTools MCP efficiently: snapshot first to get element uids, screenshot only when needed, paginate and filter large output, inspect CSS and test browser extensions. Needs chrome-devtools-mcp configured; maintained by the Chrome DevTools team.