Tools

End-to-end academic paper plugin: deep research and literature review, writing, multi-perspective simulated peer review, revision and finalization, pausing for your approval at each stage, with built-in citation verification and integrity checks. Licensed CC BY-NC.

From Obsidian CEO Steph Ango (kepano): teaches agents to write Obsidian-flavored Markdown, Bases and Canvas files and work with vaults through the Obsidian CLI, plus skills like web page content extraction. Also installable into Codex and other agents via npx skills.

Data engineering plugin from the wshobson/agents marketplace: a data engineer subagent, a data pipeline command, and skills for Airflow DAGs, dbt transformations, Spark tuning and data quality, to help build ETL and data warehouses.

MLOps plugin from the wshobson/agents marketplace: data scientist, ML engineer and MLOps engineer subagents and a /ml-pipeline command that runs the pipeline in phases from data analysis and training to deployment and monitoring, plus ML pipeline and recommender system skills.

Official Anthropic plugin that builds a shareable status page for big multi-track projects such as migrations, launches or research: goals, workstream order, next steps and risks; say 'refresh' to update the same link. Needs a claude.ai login; Artifacts are a beta for Team and Enterprise plans.

Connects Claude Code to the Pyright language server for static type checking and code intelligence in Python. Install pyright first with npm, pip or pipx. Official Anthropic plugin.

Official Anthropic plugin that solves competition math such as IMO and Putnam problems, with adversarial checks by an independent verifier that only sees the clean proof. Gives up explicitly rather than bluffing when unsure, and outputs LaTeX/PDF once verified.

For preclinical life sciences research: bundles MCP connectors for PubMed, bioRxiv, ChEMBL, Open Targets, ClinicalTrials and more, plus analysis skills for single-cell RNA QC, scvi-tools and nf-core pipelines. Official from Anthropic; some data sources need accounts.

Anthropic's official plugin that opens PDFs in a local interactive viewer where Claude proposes highlights, comments and approval stamps in batches, walks you through form filling, places signature images and exports an annotated copy. Needs Node.js 18+; signatures are not digital certificates.

Data analysis plugin: writes queries in each SQL dialect, explores datasets, runs statistical tests, charts with Python and builds interactive HTML dashboards, then reviews methods and conclusions before sharing. Connects to Snowflake, BigQuery and other warehouses. Official from Anthropic.

Google's official skill library and plugin marketplace: nearly 150 skills focused on Google Cloud (GKE, BigQuery, Cloud Run, IAM and more), plus 17 product plugins pairing skills with MCP for Cloud SQL, Spanner, AlloyDB, BigQuery, GCS and others.

Turns an Obsidian vault into a local-first knowledge base: imports sources into interlinked notes with citations, answers questions from what is already in the vault, and adds 15 skills including search, vault health checks and Canvas knowledge graphs.

Plugin marketplace for AI research with nearly 100 skills in 23 categories, from ideation, fine-tuning and post-training to distributed training, inference serving, evaluation and paper writing, coordinated end to end by the autoresearch skill.

Codex-native version of Academic Research Skills: one skill chains topic selection and literature review, drafting, simulated peer review, revision guidance and experiment planning, with citation verification and integrity checks. For grad students and faculty. Needs Codex; CC BY-NC 4.0 license.

Lets agents work with the Hugging Face Hub through the hf CLI: search and download models and datasets, manage repos and Spaces, and run training and evaluation jobs on cloud GPUs, with more workflow skills installable as needed. Maintained by Hugging Face.

OpenAI's official Codex plugin with about 50 skills that route questions to genetics, omics, pathway, protein structure, chemistry and clinical evidence sources, can split the work across parallel subagents, and synthesize sourced conclusions.

OpenAI's official Codex plugin that uses the local API of the Zotero desktop app to search your library, export BibTeX, insert citations into LaTeX or Markdown drafts, and import new references after you confirm. Requires Zotero desktop.

Consensus's official Codex plugin: uses its remote MCP to search 220 million peer-reviewed papers for literature reviews, bibliographies, research gap analysis and cited writing. Needs a Consensus sign-in; the free tier returns a limited number of results.

OpenAI's official Codex plugin that guides sequencing analysis from BCL/FASTQ: QC, RNA-seq differential expression, single-cell, variant calling and metagenomics, favoring nf-core and other public pipelines with reproducible run logs. Checks for local tools first. Research use only.

Semi-automated research assistant for CS and AI researchers that links ideation, Zotero literature management, experiment analysis and reporting, paper writing and reviewer responses, and keeps project knowledge in Obsidian. Branches for Codex and other agents exist.

Visualization skills for Obsidian that turn text into Excalidraw hand-drawn diagrams, Mermaid charts and Obsidian Canvas mind maps. Marked experimental by the author; the Excalidraw skill needs the matching Obsidian plugin.

NVIDIA's official plugin that finds and installs the right skills from NVIDIA's catalog for your task, spanning CUDA acceleration, NIM inference, NeMo training, RAG blueprints, Omniverse simulation and robotics. Listed in both the Claude and Codex official marketplaces.

Learns your domain and working style over a few rounds of conversation, then generates a personalized Markdown knowledge system (folders, note templates, processing pipelines, hooks and maps) so agents remember knowledge across sessions. First setup takes about 20 minutes and is token-heavy.

AWS's generally available agent toolkit and plugin marketplace: plugins such as aws-core, aws-agents and aws-data-analytics bundle the AWS MCP Server with evaluated skills for IaC, serverless, containers and billing. Calling AWS APIs requires configured credentials.