Tools

Command-line audio and video downloader supporting thousands of sites: pick formats and quality, grab subtitles and metadata, and merge or transcode with FFmpeg. The actively maintained fork of youtube-dl.

From Microsoft: converts PDF, Word, Excel, PowerPoint, HTML and other files or URLs to Markdown so agents can read and search them. A single convert_to_markdown tool over STDIO or local HTTP.

Converts PDF, Word, Excel, PowerPoint, HTML, images, audio and more into Markdown that keeps headings, lists and tables, ready for LLMs to read and analyze. Maintained by Microsoft; requires Python 3.10+.

Extracts text and tables from PDFs; merges, splits and rotates pages, adds watermarks, fills forms and OCRs scanned documents. The official Anthropic skill behind Claude's document features; source-available, not open source.

166 research skills maintained by K-Dense (formerly Claude Scientific Skills), spanning bioinformatics, cheminformatics, clinical research, materials and physics, including unified access to 78 public databases such as PubChem and UniProt. Works with Claude Code, Codex and Cursor.

Self-improving agent from Nous Research with built-in memory and a learning loop that turns experience into skills. Works with any model provider; the hermes command has a terminal UI, and a gateway connects it to Telegram, Slack and more and runs scheduled tasks.

High-throughput LLM inference and serving engine: vllm serve starts an OpenAI- and Anthropic-compatible server in one command. Supports 200+ model architectures from Hugging Face, quantization and distributed inference. Aimed mainly at NVIDIA, AMD and other GPUs.

Official MCP reference server that fetches web pages and converts them to Markdown for the model, reading long pages in chunks from a given offset. Zero config, but it can reach internal network addresses, so use it with care.

Official PaddleOCR MCP: text recognition and layout parsing for images and PDFs (PP-OCR, PP-StructureV3, PaddleOCR-VL), returning text or Markdown. Runs inference locally, or calls the official API or a self-hosted service.

Parses PDF, DOCX, PPTX, XLSX, HTML, images and audio, recovering layout, reading order, tables and formulas, and exports Markdown, HTML or lossless JSON. Started by IBM Research, now hosted by the LF AI & Data Foundation; runs fully locally.

Teaches agents standard single-cell RNA-seq analysis with Scanpy: QC, normalization, PCA/UMAP, clustering, differential expression and plots, with ready-to-run pipeline scripts and guidance on converting Seurat and other R objects to h5ad. Needs Python 3.12+; by K-Dense.

Guides agents to the right statistical method for research data: t-tests, ANOVA, chi-square, regression and Bayesian analysis, checking assumptions, computing effect sizes and power, and reporting results in APA format. Python-based (pingouin, statsmodels); by K-Dense.

Microsoft's open-source AI quant investment research platform: the qrun command runs dataset building, model training, backtesting and evaluation from a YAML config, with many benchmark models. The official dataset is paused, so prepare market data per the README first.

Engine for math and explainer animations in Python (Community Edition, ManimCE): write scenes and render them to video with the manim command, letting agents create teaching and science animations. On macOS install cairo and pkg-config first; formulas need LaTeX.

Converts PDFs, images, PPTX, DOCX, XLSX, EPUB and more into Markdown, JSON or HTML, preserving tables, formulas and layout, with optional LLM help for higher accuracy. Needs Python 3.10+ and PyTorch; large-scale commercial use of the model weights needs a paid license.

Adds a searchable, copyable text layer to scanned PDFs, with automatic deskew, rotation and size optimization, outputting PDF/A by default. Built on Tesseract, supports 100+ languages and runs fully locally.

Distills technical books, doc folders or paper collections (PDF, EPUB, DOCX, Markdown and more) into an agent skill with a core framework, on-demand chapter files, glossary and cheat sheet for lookup while working. Extraction needs local Python; poppler or docling optional for PDFs.

Fast speech transcription built on faster-whisper, with word-level timestamps and speaker diarization, suited to meeting notes and subtitles. Diarization needs a Hugging Face token; GPU acceleration needs CUDA.

Unofficial Python library and CLI for driving Google NotebookLM (now Gemini Notebook): bulk-import sources, ask cited questions, and generate and download podcasts, videos, slides, quizzes and flashcards. Ships an agent skill. Relies on undocumented APIs and needs a Google sign-in.

Write your resume in YAML and render a cleanly typeset PDF from the command line: multiple themes, fine control of margins, colors and fonts, strict field validation and multi-language support. A companion agent skill is available. Needs Python 3.12+.

Version datasets and models the way Git versions code: data lives in remote storage like S3 or GCS while versions are tracked in your Git repo. Also offers reproducible pipelines and local experiment tracking, rerunning only the steps affected by a change.

Multi-language git hook manager: declare formatting, lint, secret scanning and other hooks in .pre-commit-config.yaml to run automatically before each commit, or have the agent self-check with pre-commit run --all-files before committing.

ByteDance's open-source, general software engineering agent: trae-cli edits files and runs commands from natural language, supports multiple model providers and MCP, and records full execution trajectories. Transparent design suits agent research and customization. Needs your own model API key.

Bundles 60+ full-stack specialist skills into one plugin: experts for 12 languages including Python, TypeScript, Go, Rust and Java, and frameworks like React, Django and Spring Boot, activated automatically by request. Also includes Jira and Confluence workflow commands (needs Atlassian MCP).