# Tools

> Every listed resource, editors’ picks first. The filters below can be combined.

- Search: append `?q=<keywords>` to the URL. Separate several keywords with spaces; all of them must match. Matches name, repository, tags, professions, description and README.
- Filter by type: append `?type=<cli|skill|plugin|mcp>` to the URL.
- Filter by profession: append `?profession=<profession id>` to the URL. Separate several ids with commas; a resource matches when it suits any of them. Ids are listed at https://hebbmind.com/api/v1/professions
- Filter by tag: append `?tag=<tag>` to the URL. Separate several tags with commas; a resource must carry all of them. Tags are listed at https://hebbmind.com/api/v1/tags

Resources for Full-stack / Indie or DevOps / SRE or ML / AI or Research / Academia: 884 items.

> - Full-stack / Indie: General software work: coding-agent workflows, code review, debugging and Git collaboration.
> - DevOps / SRE: Deployment, monitoring, cloud resources and reliability.
> - ML / AI: Model training, evaluation and LLM application development.
> - Research / Academia: Literature search and reviews, experimental data analysis, paper writing and submission.

- [Docling MCP](https://hebbmind.com/ja/mcp/docling-mcp.md): [MCP] The Docling project's official MCP: converts PDF, Word, PowerPoint and more into structured documents with layout and table detection and OCR for scans, and lets agents build new documents paragraph by paragraph and export Markdown. Local mode needs Python and uv, or use your own Docling Serve.
- [journal-adapt-writing-skill](https://hebbmind.com/ja/skill/journal-adapt-writing-skill.md): [Skill] Rewrites a paper for a target journal: give it 5-8 papers from that journal (plus optional field or lab examples), it builds an editable style guide for your manuscript, then rewrites section by section to the journal's conventions with a change log. PDF input needs a converter such as MinerU.
- [Shopify CLI](https://hebbmind.com/ja/cli/shopify-cli.md): [CLI] Shopify's official CLI: scaffold, develop locally and deploy Shopify apps, extensions, Functions and themes, and build and host Hydrogen custom storefronts. Requires Node.js.
- [Oh My Paper](https://hebbmind.com/ja/plugin/oh-my-paper.md): [Plugin] A research plugin for Claude Code: commands like /omp:survey, /omp:experiment and /omp:write chain literature review, topic selection, experiments, writing and self-review, with 5 specialized agents and 34 research skills that remember project progress across sessions. Experiments lean toward ML.
- [The Elements of Agent Style](https://hebbmind.com/ja/skill/agent-style.md): [Skill] 21 English writing rules (12 from The Elements of Style, Orwell, Pinker and other classics, 9 from observed LLM habits) for clearer, leaner papers, grant proposals, design docs and documentation. Expository English only; not for fiction or marketing copy.
- [Paper Lifecycle](https://hebbmind.com/ja/skill/paper-lifecycle.md): [Skill] Two skills for before and after peer review: review-revision checks a manuscript as a senior reviewer would and plans section-by-section revisions; rebuttal-response triages reviewer comments, plans extra evidence and drafts point-by-point replies. Takes PDF, LaTeX, Word or Markdown.
- [PaperOrchestra](https://hebbmind.com/ja/skill/paperorchestra.md): [Skill] The five-agent PaperOrchestra pipeline (outline, figures, literature review, section writing, polishing) as skills: turns research ideas, experiment logs and a conference template into a LaTeX paper and checks citations via Semantic Scholar. Needs Python; verify the draft yourself.
- [Econ Writing Skill](https://hebbmind.com/ja/skill/econ-writing-skill.md): [Skill] Economics writing skill built on 50+ guides (Cochrane, McCloskey and others): shapes abstracts, introductions and conclusions by paper type and 13 identification strategies such as DiD, IV and RDD, simulates three referee scores and flags citations to verify.
- [latexdiff](https://hebbmind.com/ja/cli/latexdiff.md): [CLI] Compares two versions of a LaTeX manuscript and produces a .tex that marks additions and deletions in color and strikethrough; compile it for a tracked-changes PDF to show reviewers, or diff versions from Git history. Ships with TeX Live and MiKTeX; needs Perl.
- [SonarQube MCP Server](https://hebbmind.com/ja/mcp/sonarqube-mcp-server.md): [MCP] Official SonarSource server: connects to SonarQube Server or Cloud so agents can query code issues, quality gates, security hotspots and dependency risks, and analyze file contents directly. Needs a SonarQube token; Docker is the recommended way to run it.
- [Firecrawl](https://hebbmind.com/ja/skill/firecrawl.md): [Skill] Official Firecrawl skill: drives the Firecrawl CLI to search, scrape, map site URLs, batch-crawl, interact with pages and monitor changes, returning LLM-ready Markdown. Search and scrape have a rate-limited free tier; crawling and monitoring need an account or self-hosted instance.
- [Firecrawl CLI](https://hebbmind.com/ja/cli/firecrawl-cli.md): [CLI] Firecrawl's official CLI: scrape, search, map and crawl sites and interact with pages in a browser from the terminal, with Markdown output; can also install companion skills for coding agents. Needs a Firecrawl account or API key, or point it at a self-hosted instance.
- [BioMCP](https://hebbmind.com/ja/mcp/biomcp.md): [MCP] Searches about 30 biomedical sources, including PubMed, ClinicalTrials.gov, ClinVar and OncoKB, with one command syntax, covering literature, clinical trials, genetic variants, drugs and pathways. Ships as both a CLI and an MCP server.
- [Neon MCP Server](https://hebbmind.com/ja/mcp/mcp-server-neon.md): [MCP] Manage Postgres databases on Neon in natural language: create projects and branches, run SQL, and use branches for migrations and query tuning. Remote server hosted by Neon with OAuth or API key auth and a read-only mode; Neon recommends it for development only.
- [Knowledge Absorber](https://hebbmind.com/ja/skill/studyanalysis-skills.md): [Skill] Turns web pages, long PDFs, Word files, images or code into tutor-style study notes: Markdown notes plus searchable HTML knowledge cards with concept breakdowns and mind maps. Needs Python 3.8+, plus Chrome for some sites; the optional tutor chat needs an OpenAI-compatible API key.
- [MCP Mermaid](https://hebbmind.com/ja/mcp/mcp-mermaid.md): [MCP] Generates flowcharts, sequence diagrams, class diagrams and other charts from Mermaid syntax with configurable theme and background, exporting SVG or PNG files or a mermaid.ink share link. Validates syntax so the model can fix errors over several turns.
- [Redis MCP Server](https://hebbmind.com/ja/mcp/mcp-redis.md): [MCP] Redis's official MCP server: read and write strings, hashes, lists, streams, JSON and other data structures in natural language, with vector indexing and search and pub/sub. Bring your own Redis instance; runs via uvx.
- [Cloud Run MCP Server](https://hebbmind.com/ja/mcp/cloud-run-mcp.md): [MCP] Lets agents deploy a local folder or file contents straight to Google Cloud Run, list services and view their details and logs, and list or create GCP projects. Maintained by Google; sign in with gcloud and set up Application Default Credentials first.
- [PubMed](https://hebbmind.com/ja/plugin/pubmed.md): [Plugin] PubMed plugin from Anthropic's life sciences marketplace: connects to the US National Library of Medicine's remote MCP to search biomedical literature and research papers. No account needed.
- [BioRender](https://hebbmind.com/ja/plugin/biorender.md): [Plugin] Official BioRender plugin in Anthropic's life sciences marketplace: connects Claude Code to BioRender's scientific icons, templates and figures to find assets and make paper figures, lecture slides and talk graphics. Needs a free BioRender account; authorize it in /plugin after installing.
- [Wiley Scholar Gateway](https://hebbmind.com/ja/plugin/wiley-scholar-gateway.md): [Plugin] Plugin from Wiley in Anthropic's life sciences marketplace: connects the Scholar Gateway remote MCP for semantic search across Wiley's peer-reviewed journals, with answers carrying checkable citations and DOI links. Good for literature reviews. Needs a free Scholar Gateway account.
- [Scientific Problem Selection](https://hebbmind.com/ja/skill/scientific-problem-selection.md): [Skill] Anthropic's official research skill built on Fischbach and Walsh's problem-selection framework (Cell): a conversational guide to refining project ideas, assessing risk and success criteria, unblocking stalled research and choosing directions. No setup or account needed.
- [Life Sciences](https://hebbmind.com/ja/plugin/life-sciences.md): [Plugin] Anthropic's official life sciences plugin marketplace: install MCP plugins such as PubMed, BioRender, Synapse, ChEMBL and 10x Genomics, plus research skills for single-cell RNA QC, Nextflow pipelines and scvi-tools. Some data sources need an account or subscription.
- [Railway CLI](https://hebbmind.com/ja/cli/railwayapp-cli.md): [CLI] Railway's official CLI: deploy with railway up and manage infrastructure config, with token auth for non-interactive CI runs. The installer can set up the Railway skill and MCP for Claude Code, Codex and others in one step. Needs a Railway account.
- [YouTube Notetaker](https://hebbmind.com/ja/plugin/youtube-notetaker.md): [Plugin] DAIR.AI learning plugin that turns YouTube lectures and talks into local study material: extracts slide frames, builds timestamped transcripts, and lets you take notes and review in a bundled web viewer. Needs Python, yt-dlp and ffmpeg.
- [Shopify AI Toolkit](https://hebbmind.com/ja/plugin/shopify-ai-toolkit.md): [Plugin] Shopify's official agent plugin: searches Shopify docs and API schemas, validates GraphQL, Liquid and UI extension code, and can manage stores through the Shopify CLI. Sends usage telemetry by default; it can be turned off.
- [DuckDB Skills](https://hebbmind.com/ja/skill/duckdb-skills.md): [Skill] Official DuckDB skills: query local or S3 CSV, Parquet, Excel and JSON files with SQL or plain language, attach databases, convert formats, analyze spatial data and look up documentation. Needs the DuckDB CLI; tested only on macOS and Linux.
- [The Elements of Style](https://hebbmind.com/ja/plugin/the-elements-of-style.md): [Plugin] Turns Strunk's The Elements of Style (1918) into a writing skill so agents write docs, commit messages and error messages clearly and concisely. The full text (about 12k tokens) loads only when needed. By the author of Superpowers.
- [Docker Skills](https://hebbmind.com/ja/skill/docker-skills.md): [Skill] Official Docker skills: containerize projects, optimize and harden Dockerfile builds, orchestrate with Compose, use Docker Sandboxes and Docker Agent, with confirmation guardrails before deletes and other destructive actions.
- [Elastic Agent Skills](https://hebbmind.com/ja/skill/elastic-agent-skills.md): [Skill] Elastic's official skills teaching agents to use Elasticsearch and Kibana correctly: index design, ES|QL queries, search relevance tuning, dashboards, observability troubleshooting and security alert triage. Currently a technical preview.
- [Argo CD MCP Server](https://hebbmind.com/ja/mcp/mcp-for-argocd.md): [MCP] Manage Argo CD in natural language: list and inspect applications, create, update and delete them and trigger syncs, and view resource trees, workload logs and events. Maintained by Argo Project Labs; needs your Argo CD URL and an API token, with an optional read-only mode.
- [Chroma MCP Server](https://hebbmind.com/ja/mcp/chroma-mcp.md): [MCP] Chroma's official MCP: lets agents create and manage collections, add documents, and retrieve them with vector search, full-text search and metadata filters. Connects to in-memory or local persistent stores, self-hosted instances or Chroma Cloud.
- [REUSE Tool](https://hebbmind.com/ja/cli/reuse-tool.md): [CLI] Official FSFE command-line tool that checks every file in a project for copyright and license information per the REUSE spec, adds headers in bulk, downloads license texts and generates an SPDX bill of materials. Needs Python; have legal review the results.
- [Human Skill Tree](https://hebbmind.com/ja/skill/human-skill-tree.md): [Skill] 33 cognitive-science-based tutoring skills for K-12 math and science, exam prep, university subjects, academic writing and job interviews, using Socratic questions and spaced review rather than giving answers. In Chinese and English; copy the skills folder into your agent manually.
- [mcp-pandoc](https://hebbmind.com/ja/mcp/mcp-pandoc.md): [MCP] Converts between Markdown, Word, HTML, LaTeX, EPUB and more with Pandoc, exports PDF and PPTX, and can apply a Word template for consistent styling, handy for formatting manuscripts and handouts. Needs Pandoc and uv; PDF export also needs TeX Live.
- [ScholarAIO](https://hebbmind.com/ja/cli/scholaraio.md): [CLI] Research workbench that turns paper PDFs into a searchable library so Claude Code or Codex can find and close-read papers, draft reviews and manuscripts, answer reviewer comments and check citations. Imports from Zotero and EndNote. Needs Python 3.10+; an LLM API key is optional.
- [Resend MCP Server](https://hebbmind.com/ja/mcp/resend-mcp.md): [MCP] Resend's official MCP: lets agents send and receive email and manage contacts, broadcasts and sending domains. Use the hosted remote server with OAuth sign-in, or run the npm package locally with a Resend API key.
- [Learn This (Tapestry Skills)](https://hebbmind.com/ja/skill/learn-this.md): [Skill] Give it a YouTube video, web article or PDF link and it extracts the transcript or text, then builds a five-round Ship-Learn-Next action plan saved as Markdown, for self-study. Needs CLI tools such as yt-dlp and pdftotext; videos default to English subtitles.
- [YouTube MCP Server](https://hebbmind.com/ja/mcp/mcp-youtube.md): [MCP] Uses yt-dlp to pull YouTube subtitles into the agent, so asking it to summarize a video gets you the key points; handy for teachers prepping lessons, researchers and creators. No API key, but needs yt-dlp (Homebrew or WinGet) and Node.js.
- [lean-lsp-mcp](https://hebbmind.com/ja/mcp/lean-lsp-mcp.md): [MCP] MCP server for the Lean 4 theorem prover: lets agents read proof goals, diagnostics and definitions and search theorems via LeanSearch and Loogle, helping mathematicians and students with formal proofs. Needs uv and the Lean toolchain; run it from the Lean project root.
- [Google Security Operations and Threat Intelligence MCP Server](https://hebbmind.com/ja/mcp/mcp-security.md): [MCP] Google's official security MCP servers for Google SecOps (Chronicle), SecOps SOAR, Google Threat Intelligence and Security Command Center: investigate alerts, hunt threats, look up IOCs and review cloud risks. Needs Google Cloud credentials or a VirusTotal API key.
- [Academic Writing Skills](https://hebbmind.com/ja/skill/academic-writing-skills.md): [Skill] Post-draft polishing skills for English LaTeX papers, Chinese theses (GB/T 7714) and Typst manuscripts: compile diagnostics, format and grammar checks, reference verification, reviewer-style assessment, cover letters and defense slides. Needs Python, uv and TeX Live; academic use only.
- [Claude Code LSPs](https://hebbmind.com/ja/plugin/claude-code-lsps.md): [Plugin] Third-party LSP plugin marketplace with 30+ language server plugins, including TypeScript, Python, Rust, Go, Java, C/C++, Vue, Svelte, Elixir and Haskell, covering more languages than the official set. Requires Claude Code 2.1.50+; install the language servers yourself.
- [Prometheus MCP Server](https://hebbmind.com/ja/mcp/prometheus-mcp-server.md): [MCP] Lets agents query Prometheus metrics with PromQL and browse metric metadata and scrape targets to help investigate alerts and performance issues. Supports basic auth, bearer tokens and multi-tenancy; Docker is the recommended way to run it.
- [Stata MCP](https://hebbmind.com/ja/mcp/stata-mcp.md): [MCP] Connects Stata to VS Code or Cursor and exposes a local MCP endpoint so Claude Code or Codex can write and run do-files and read regression output, with graphs shown in the editor; for empirical research. Needs a licensed Stata 17+, the extension installed and the editor open.
- [ElevenLabs Skills](https://hebbmind.com/ja/skill/elevenlabs-skills.md): [Skill] Official ElevenLabs skills: text to speech, speech to text, sound effects and music generation, voice changing, vocal isolation, multilingual dubbing and building voice agents. Needs an ElevenLabs API key.
- [AI Research Feedback](https://hebbmind.com/ja/skill/ai-research-feedback.md): [Skill] Paper review skills by economist Claes Bäckman: eight subagents simulate journal referees for a pre-submission report, plus quick checks, paper-code consistency checks, reviews of pre-analysis plans and grant proposals, and rewriting papers as policy briefs. Mainly for LaTeX manuscripts.
- [Learn Anything](https://hebbmind.com/ja/cli/learn-anything.md): [CLI] Adds /learn commands to 30+ agents including Claude Code, Codex and Cursor: knowledge maps, layered Socratic explanations, quizzes and spaced review, with a visual learning dashboard. Geared to self-study of programming and other technical topics; needs Node.js 20+.
- [Claude Trading Skills (AGIPro)](https://hebbmind.com/ja/skill/agiprolabs-claude-trading-skills.md): [Skill] 68 trading and quant skills focused on crypto and DeFi: market and on-chain data, technical indicators, backtesting, position sizing and risk, prediction markets, and tax tools for cost basis and wash sales. Most need Python and data API keys (often free tiers); get expert review.
- [Episodic Memory](https://hebbmind.com/ja/plugin/episodic-memory.md): [Plugin] Semantic search over past Claude Code, Codex and other agent sessions: indexes each conversation when it ends and recalls past discussions, decisions and trade-offs via MCP tools and a subagent. Embedding and search run locally. By the author of Superpowers.

Next page: https://hebbmind.com/ja/tools.md?page=16&profession=fullstack%2Cdevops%2Calgorithm%2Cresearch
