# Tools

> Every listed resource, editors’ picks first. The filters below can be combined.

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Resources for ML / AI or Data engineering or Research / Academia: 402 items.

> - ML / AI: Model training, evaluation and LLM application development.
> - Data engineering: Data pipelines, warehouse modeling, ETL and data quality.
> - Research / Academia: Literature search and reviews, experimental data analysis, paper writing and submission.

- [Brave Search MCP Server](https://hebbmind.com/ja/mcp/brave-search-mcp-server.md): [MCP] Brings the Brave Search API to agents: web, news, image, video and local business and place search, plus LLM-ready page context and AI summaries. Maintained by Brave; needs an API key.
- [OpenContracts](https://hebbmind.com/ja/mcp/opencontracts.md): [MCP] Self-hosted open-source platform for contract and legal document analysis: detects cited laws and builds a citation graph, and its MCP server lets agents search the corpus, read texts and annotations, and follow citations. Deploy your own instance with Docker; have a lawyer review results.
- [ROS MCP Server](https://hebbmind.com/ja/mcp/ros-mcp-server.md): [MCP] Connects LLMs to ROS and ROS 2 robots: publish and subscribe to topics, call services and actions, set parameters, and read sensor and robot state, without changing robot code. The robot side needs rosbridge running.
- [daymade Claude Code Skills](https://hebbmind.com/ja/plugin/claude-code-skills.md): [Plugin] A plugin marketplace with dozens of plugins: an enhanced skill-creator, scrapers for Bilibili, Douban and Feishu docs, China A-share news and US stock fundamentals, WeCom notifications, deep research and fact-checking, with docs in English and Chinese.
- [daymade-audio](https://hebbmind.com/ja/plugin/daymade-audio.md): [Plugin] Audio plugin suite: transcription with local Qwen3-ASR or Whisper (MLX on Apple Silicon), speaker diarization, transcript correction, structured meeting notes and StepFun TTS. StepFun ASR and TTS need an API key.
- [Academic Paper Skills](https://hebbmind.com/ja/skill/academic-paper-skills.md): [Skill] Two-stage paper skills: planning studies the style of your target preprint server (e.g. PhilArchive, arXiv), finds gaps in the literature and scores a seven-dimension mock review; writing drafts and checks each chapter from the outline. Suits philosophy and interdisciplinary work; needs Python 3.
- [Claude Video Vision](https://hebbmind.com/ja/plugin/claude-video-vision.md): [Plugin] Lets Claude Code watch videos: extracts frames with ffmpeg and transcribes timestamped audio from local files or YouTube links, to review footage, summarize lectures or find on-screen text. Needs Node.js 20+ and ffmpeg (yt-dlp for YouTube); transcribe with local Whisper or a Gemini/OpenAI key.
- [Academic Presentations Skill](https://hebbmind.com/ja/skill/academic-pptx-skill.md): [Skill] Builds conference talks, lab meeting decks, defenses, lectures and grant reports to academic norms: assertion-style titles, slides ordered by the argument, one cited chart per results slide, and a closing conclusions slide. Pair with Anthropic's pptx skill; on claude.ai, enable code execution.
- [paper-craft-skills](https://hebbmind.com/ja/skill/paper-craft-skills.md): [Skill] Turns a paper (arXiv link or PDF) into method diagrams, slides with a generated image per page (PPTX/PDF export) and an in-depth HTML explainer with formulas, for lab meetings and lectures. No API key; images use Codex's built-in generator or, in Claude Code, a separate image skill.
- [MySQL MCP Server](https://hebbmind.com/ja/mcp/mysql-mcp-server.md): [MCP] Gives agents controlled access to MySQL: list databases and tables, inspect schemas and sample data, and run SQL, with multi-database mode, SSL and SSH tunnels. Configure your own database user, ideally with least privilege.
- [Mirobody](https://hebbmind.com/ja/mcp/mirobody.md): [MCP] Self-hosted engine that maps lab results, checkup reports and wearable data to standard metrics so agents can chart trends, citing the source file for every number. uvx mirobody mcp gives the coding tools; full records need Docker and an LLM API key. A doctor should review results.
- [Tutor Skills](https://hebbmind.com/ja/skill/tutor-skills.md): [Skill] Two companion skills: /tutor-setup turns PDFs, lecture notes or a codebase into an Obsidian study vault with concept notes and practice questions, and /tutor quizzes you with multiple-choice questions on weak spots and tracks mastery. For students reviewing or self-studying; best viewed in Obsidian.
- [nbgrader](https://hebbmind.com/ja/cli/nbgrader.md): [CLI] Jupyter's official tool for notebook assignments: once teachers mark up questions and solutions, the CLI generates student versions, collects submissions, auto-grades and produces feedback. Suits programming and data courses. Needs Python and Jupyter; assignments must use nbgrader's markup.
- [whisper-ctranslate2](https://hebbmind.com/ja/cli/whisper-ctranslate2.md): [CLI] Local transcription that's compatible with the OpenAI Whisper CLI but faster and lighter: outputs SRT/VTT subtitles or text and can transcribe a live microphone. Needs Python; models download on first run; speaker labels need pyannote.audio and a Hugging Face token.
- [Awesome Journal Skills](https://hebbmind.com/ja/skill/awesome-journal-skills.md): [Skill] Submission skill packs tailored to 700+ journals and conferences, from AER, Nature and NEJM to top CS venues and leading Chinese journals, to revise papers to each venue's scope, style and requirements. Add its Claude Code marketplace per the README, then install packs per journal.
- [DocuTranslate](https://hebbmind.com/ja/mcp/docutranslate.md): [MCP] Local LLM-powered document translator for PDF, Word, Excel, EPUB, SRT subtitles and more; Word and Excel keep their formatting, glossaries can be built automatically, and agents can submit jobs via MCP. Needs uv and an OpenAI-compatible API key; translated PDFs lose the original layout.
- [SearXNG MCP Server](https://hebbmind.com/ja/mcp/mcp-searxng.md): [MCP] Web search and page reading for agents through a self-hosted or trusted SearXNG metasearch instance, with no paid search API key. Requires a SearXNG instance with JSON output enabled.
- [dailypaper-skills](https://hebbmind.com/ja/skill/dailypaper-skills.md): [Skill] Pulls new papers from Hugging Face Daily Papers and arXiv, scores them by research area into a recommendation page, and writes deep-read Obsidian notes for key ones; can also batch-read Zotero collections. Needs Python 3, Obsidian and poppler; copy the whole skills folder per the README.
- [LangChain Skills](https://hebbmind.com/ja/skill/langchain-skills.md): [Skill] LangChain's official skill collection: framework selection, quickstarts, middleware, persistence, human-in-the-loop approval, RAG and eval design across LangChain, LangGraph and Deep Agents, in Python and TypeScript. Also installable as a Claude Code plugin. Still in early development.
- [Jupyter MCP Server](https://hebbmind.com/ja/mcp/jupyter-mcp-server.md): [MCP] Connects agents to live Jupyter notebooks: read, write, insert and execute cells and read multimodal outputs like charts, for interactive data analysis. Bring your own JupyterLab or JupyterHub; open source, maintained by Datalayer.
- [Simulink Agentic Toolkit](https://hebbmind.com/ja/plugin/simulink-agentic-toolkit.md): [Plugin] MathWorks' official toolkit for reading, building, modifying and testing Simulink models via the MATLAB MCP server, with skills for control design, Simscape, code generation and compliance checks. Needs licensed MATLAB R2023a+ and Simulink; run the official installer in MATLAB first.
- [DeepPaperNote](https://hebbmind.com/ja/skill/deeppapernote.md): [Skill] Turns a paper (title, DOI, arXiv ID or local PDF) into a structured Obsidian note covering the research question, method, key formulas, figures and limitations; can read local Zotero items first and includes a glossary-card skill. Needs Python 3.10+ and PyMuPDF.
- [sacreBLEU](https://hebbmind.com/ja/cli/sacrebleu.md): [CLI] The standard machine translation scorer: computes BLEU, chrF and TER with significance tests and downloads public test sets such as WMT, to compare engines or prompts. Needs Python 3.9+ and reference translations; automatic metrics are a rough screen, so final copy still needs human review.
- [Zotero MCP Plugin](https://hebbmind.com/ja/mcp/cookjohn-zotero-mcp.md): [MCP] A Zotero 7 plugin with a built-in MCP server: agents search your local library (title, author, tags, full text), read PDF full text, abstracts, notes and highlights, and create notes and tags. Needs Zotero desktop with the plugin enabled; semantic search needs OpenAI or Ollama embeddings.
- [Power BI Authoring MCP Server](https://hebbmind.com/ja/mcp/powerbi-modeling-mcp.md): [MCP] Microsoft's official local MCP server for creating and editing Power BI semantic model tables, measures and relationships in natural language, running and validating DAX queries, and bulk renaming and translation. Connects to Power BI Desktop, Fabric or PBIP files; in public preview.
- [Manim Skills](https://hebbmind.com/ja/skill/manim-skill.md): [Skill] Breaks a rough explanation idea into a scene-by-scene storyboard, then writes animation code following best practices for Manim Community or 3Blue1Brown's ManimGL, for math and physics explainers in class demos and educational videos. Needs Python, FFmpeg and LaTeX installed locally.
- [MATLAB Agentic Toolkit](https://hebbmind.com/ja/plugin/matlab-agentic-toolkit.md): [Plugin] MathWorks' official toolkit: set up the MCP server via the MATLAB installer so agents can run code, run tests and do static checks; domain skill sets for signal processing, controls, statistics and machine learning install as Claude Code plugins. Needs MATLAB R2021a+.
- [PaperJury](https://hebbmind.com/ja/skill/paperjury.md): [Skill] Pre-submission review for CS conference papers (CVPR, ACL, NeurIPS and more): polish, translate or condense on request, or let AI reviewers raise issues and a jury rule on them. Only wording fixes are drafted, with your approval; missing experiments go back to you, never invented. Needs Node.js.
- [learn-from-materials](https://hebbmind.com/ja/skill/learn-from-materials.md): [Skill] Turns books, PDFs, slides, Word files and web pages into a traceable knowledge base and an offline interactive study page with core frameworks, a glossary, a concept map, self-tests and local notes, keeping source text apart from model additions. Needs Python 3.10+.
- [hashcards](https://hebbmind.com/ja/cli/hashcards.md): [CLI] Plain-text spaced repetition: Q&A and cloze cards live in Markdown files, agents can draft decks from notes or textbooks and validate them with hashcards check, and hashcards drill runs FSRS reviews in your browser. Install with cargo or grab a macOS, Linux or Windows release.
- [MongoDB MCP Server](https://hebbmind.com/ja/mcp/mongodb-mcp-server.md): [MCP] Connects agents to MongoDB and Atlas: query, aggregate, inspect collection schemas and indexes, and manage Atlas clusters, projects and database users. Maintained by MongoDB; needs a connection string or an Atlas service account; supports read-only mode.
- [QGIS MCP](https://hebbmind.com/ja/mcp/qgis-mcp.md): [MCP] Connects the QGIS desktop GIS to Claude: create and save projects, load vector and raster layers, run Processing toolbox algorithms, export maps and execute PyQGIS code through chat. Needs QGIS 3 and uv; download the repo, copy the plugin into QGIS's plugin folder and start the server.
- [Pixelle MCP](https://hebbmind.com/ja/mcp/pixelle-mcp.md): [MCP] Turns ComfyUI workflows into MCP tools with no code, covering generation and conversion across text, image, speech and video; works with local ComfyUI or RunningHub in the cloud. Start the server with uvx pixelle and configure an LLM first.
- [bibtex-tidy](https://hebbmind.com/ja/cli/bibtex-tidy.md): [CLI] Cleans up BibTeX bibliographies: normalizes field formatting and indentation, sorts entries, merges or removes duplicates and strips chosen fields, rewriting the .bib in place or printing to stdout; also works as a pre-commit hook. Needs Node.js.
- [pandoc-crossref](https://hebbmind.com/ja/cli/pandoc-crossref.md): [CLI] A Pandoc filter that numbers figures, tables, equations and sections and builds cross-references, so numbering stays right when you write papers or reports in Markdown and convert to Word, PDF or HTML. Needs a matching Pandoc version; Homebrew on macOS installs a compatible Pandoc too.
- [anymd](https://hebbmind.com/ja/mcp/pdf-reader-mcp.md): [MCP] Converts PDF, Word, PowerPoint, Excel, EPUB, web pages and images to clean Markdown locally, keeping page anchors, tables and two-column reading order, with full-text search across folders. Formerly pdf-reader-mcp; no uploads, no API key. Needs Node.js 18+; OCR for scans needs tesseract.
- [TeXtidote](https://hebbmind.com/ja/cli/textidote.md): [CLI] Checks spelling, grammar and formatting in LaTeX and Markdown sources (e.g. figures never referenced), mapping each issue back to the source line, with optional HTML reports. Grammar checks use LanguageTool and support English, German, French and more; Homebrew on macOS bundles Java.
- [comfy-cli](https://hebbmind.com/ja/cli/comfy-cli.md): [CLI] ComfyUI's official CLI: install and launch ComfyUI in one step, manage custom nodes and model downloads, and run image and video workflows, with --json output on every command for agents. Can also submit jobs to paid Comfy Cloud.
- [Neo4j Cypher MCP Server](https://hebbmind.com/ja/mcp/mcp-neo4j-cypher.md): [MCP] Graph database MCP server from Neo4j Labs: reads the graph schema and runs read and write Cypher queries, with read-only mode, query timeouts and response token limits. Needs a Neo4j instance with the APOC plugin enabled.
- [Manim Slides](https://hebbmind.com/ja/cli/manim-slides.md): [CLI] Turns Manim animations into step-through slide decks: mark slide breaks in scene code, render, then present with manim-slides or export to HTML, PDF or PPTX, for math and science classes and talks. Scenes are Python (agents can write them); needs Manim, plus LaTeX for formulas.
- [Education Agent Skills Library](https://hebbmind.com/ja/skill/education-agent-skills.md): [Skill] 165 teaching skills grounded in learning-science research, covering course design, lesson planning, assessment, classroom questioning and student self-study coaching, for teachers and instructional designers. Install all at once as a Claude Code or Codex plugin, or copy them one by one.
- [Paper Plot Skills](https://hebbmind.com/ja/skill/paper-plot-skills.md): [Skill] Plotting skills for academic papers: bar, line, scatter, radar and other styles distilled from 9 real paper figures. Plot your own data in a chosen style as 300 dpi figures, or reproduce a matplotlib script from a paper screenshot. Needs local Python and matplotlib.
- [translate-polisher](https://hebbmind.com/ja/skill/translate-polisher.md): [Skill] Translates articles between Chinese and English or Chinese and Japanese (not English-Japanese) in four steps: analysis, draft, review and final, with options for target audience, style and glossary, aiming for natural-sounding output. No account or API key; URLs are fetched via r.jina.ai.
- [COMSOL MCP Server](https://hebbmind.com/ja/mcp/comsol-multiphysics-mcp.md): [MCP] 100+ tools that let agents drive COMSOL Multiphysics: build models, set geometry and physics (heat transfer, fluids, electrostatics, solid mechanics), mesh, solve and export results; the accompanying paper is in Neurocomputing. Needs licensed COMSOL 5.x/6.x, Python and Java; install from the repo.
- [Digital Oracle](https://hebbmind.com/ja/skill/digital-oracle.md): [Skill] Answers macro questions with market data: combines 13 free sources including Polymarket and Kalshi prediction markets, US Treasury yields, CFTC positioning, SEC insider trades and A-share fund flows into probability estimates, reasoning and scenarios. No API key; needs uv. Not investment advice.
- [ClickHouse MCP Server](https://hebbmind.com/ja/mcp/mcp-clickhouse.md): [MCP] Runs SQL queries against ClickHouse and browses databases and table schemas, read-only by default; can also enable embedded chDB to query data directly in files and URLs. Maintained by ClickHouse.
- [Jina AI MCP Server](https://hebbmind.com/ja/mcp/jina-ai-mcp.md): [MCP] Jina AI's official remote MCP: converts web pages and PDFs to Markdown, searches the web, arXiv, SSRN and images, and offers screenshots, reranking and semantic dedup. Reading tools work without a key (rate-limited); search and rerank need a Jina API key.
- [Reddit MCP Buddy](https://hebbmind.com/ja/mcp/reddit-mcp-buddy.md): [MCP] Lets agents browse subreddits, search posts, read comments and analyze user activity, useful for customer sentiment, competitor feedback and market research. Browsing needs no account; search and comments need free Reddit app credentials. Requires Node.js.
- [LaTeX Document Skill](https://hebbmind.com/ja/skill/latex-document-skill.md): [Skill] Describe what you need and get a typeset PDF: turn handwritten notes or scanned textbooks into LaTeX handouts and cheat sheets, make exams with answer keys, write papers, theses, posters, resumes and letters. 27 templates plus chart and mail-merge scripts. Needs TeX Live (install script included).
- [COMET](https://hebbmind.com/ja/cli/comet.md): [CLI] Unbabel's machine-translation quality metric: comet-score rates translations per sentence and overall, XCOMET marks error spans and severity, and CometKiwi works without a reference. Good for spot-checking MT. Needs Python 3.8+; models download from Hugging Face, some need a license; GPU helps.

Next page: https://hebbmind.com/ja/tools.md?page=7&profession=algorithm%2Cdata-engineering%2Cresearch
