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Skill suite for the whole academic research workflow: deep research (including PRISMA systematic reviews), paper writing, multi-perspective peer review and revision, pausing for human approval at each stage, with citation and integrity checks. CC BY-NC, non-commercial only.

End-to-end academic paper plugin: deep research and literature review, writing, multi-perspective simulated peer review, revision and finalization, pausing for your approval at each stage, with built-in citation verification and integrity checks. Licensed CC BY-NC.

Systematic literature reviews following PRISMA and similar standards: searches PubMed, arXiv, bioRxiv and other databases, verifies each citation's DOI, and outputs Markdown and PDF in APA, Nature or other styles. Main web search uses parallel-cli and needs a Parallel account.

Codex-native version of Academic Research Skills: one skill chains topic selection and literature review, drafting, simulated peer review, revision guidance and experiment planning, with citation verification and integrity checks. For grad students and faculty. Needs Codex; CC BY-NC 4.0 license.

Twelve research skills from Prof. Yuyu Luo's team at HKUST (Guangzhou), built on a decade of top-venue publishing and reviewing: idea evaluation, intro and body writing, polishing, surveys, pre-submission review, figures, Draw.io rebuilds and rebuttals. Non-commercial license.

Deep research assistant that runs locally with a built-in MCP server: searches arXiv, PubMed, Wikipedia and more over multiple rounds and writes cited reports. Needs Python 3.12+, uv and an LLM (local Ollama or an API key); web search needs SearXNG or similar. Runs take minutes to half an hour.

OpenAI's official Codex plugin that uses the local API of the Zotero desktop app to search your library, export BibTeX, insert citations into LaTeX or Markdown drafts, and import new references after you confirm. Requires Zotero desktop.

Unofficial CLI and MCP that let agents work with NotebookLM (now Gemini Notebook): bulk-import sources, ask questions with citations, and generate audio overviews, quizzes, flashcards, mind maps and slides. Uses undocumented APIs and may break; needs a Google sign-in and uv.

Semi-automated research assistant for CS and AI researchers that links ideation, Zotero literature management, experiment analysis and reporting, paper writing and reviewer responses, and keeps project knowledge in Obsidian. Branches for Codex and other agents exist.

Connects to your local or cloud Zotero library: search by title, full text or semantics, read PDFs and annotations, add items by DOI and organize collections. Needs Python 3.10+; for local mode, enable the local API in Zotero settings first.

Empirical social science skills from Stanford REAP and CoPaper.AI, bundling 77 in-house and third-party collections: topic selection, literature reviews, DID/RD/IV identification, regression tables in Python, Stata or R, robustness audits and paper writing. Stata flows need Stata installed.

Thesis workflow for undergrad and grad students: Q&A to settle topic and outline, then chapter drafting, literature reviews, pre-submission self-review and AI-tone polishing, with modules for law, medicine and social sciences. Outputs Markdown or compilable LaTeX; won't fabricate citations.

A research-writing plugin from K-Dense: searches the literature in real time before drafting, then produces papers, reviews, grant proposals, posters and slides with verifiable citations and figures. Literature search needs a Parallel API key; PDF output needs LaTeX.

Two-stage deep research: drafts an editable outline for the topic, then parallel subagents search the web item by item and compile a Markdown report. Good for literature reviews, competitor research and due diligence. Install by copying files per the README, plus pip install pyyaml.

550+ medical research skills from AIPOCH: PubMed search strategy, study design and sample size, statistics and bioinformatics, journal writing and reviewer responses, all vetted by MedSkillAudit. Some need Python/R or database credentials; have researchers and clinicians review results.

Command-line reference and bibliography manager: add papers by DOI with metadata fetched automatically, search by author, title or tag, and import or export BibTeX. Each entry is a readable YAML file that agents can read and write easily; a web UI is included. Needs Python.

Two-stage paper skills: planning studies the style of your target preprint server (e.g. PhilArchive, arXiv), finds gaps in the literature and scores a seven-dimension mock review; writing drafts and checks each chapter from the outline. Suits philosophy and interdisciplinary work; needs Python 3.

A Zotero 7 plugin with a built-in MCP server: agents search your local library (title, author, tags, full text), read PDF full text, abstracts, notes and highlights, and create notes and tags. Needs Zotero desktop with the plugin enabled; semantic search needs OpenAI or Ollama embeddings.

A research plugin for Claude Code: commands like /omp:survey, /omp:experiment and /omp:write chain literature review, topic selection, experiments, writing and self-review, with 5 specialized agents and 34 research skills that remember project progress across sessions. Experiments lean toward ML.

The five-agent PaperOrchestra pipeline (outline, figures, literature review, section writing, polishing) as skills: turns research ideas, experiment logs and a conference template into a LaTeX paper and checks citations via Semantic Scholar. Needs Python; verify the draft yourself.

PubMed plugin from Anthropic's life sciences marketplace: connects to the US National Library of Medicine's remote MCP to search biomedical literature and research papers. No account needed.

Plugin from Wiley in Anthropic's life sciences marketplace: connects the Scholar Gateway remote MCP for semantic search across Wiley's peer-reviewed journals, with answers carrying checkable citations and DOI links. Good for literature reviews. Needs a free Scholar Gateway account.

Research workbench that turns paper PDFs into a searchable library so Claude Code or Codex can find and close-read papers, draft reviews and manuscripts, answer reviewer comments and check citations. Imports from Zotero and EndNote. Needs Python 3.10+; an LLM API key is optional.

Post-draft polishing skills for English LaTeX papers, Chinese theses (GB/T 7714) and Typst manuscripts: compile diagnostics, format and grammar checks, reference verification, reviewer-style assessment, cover letters and defense slides. Needs Python, uv and TeX Live; academic use only.