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Distributed data integration tool and Apache top-level project with 160+ connectors for batch, real-time and CDC sync. Define jobs in config files and run them on the built-in Zeta engine or on Flink or Spark. Requires Java.

High-accuracy retrieval-augmented Q&A over paper PDFs, text and Office documents, filling in citation metadata, checking retractions and attaching traceable sources to answers. Provides the pqa CLI and a Python library. Needs an LLM API key by default; local models can be configured.

Deep research assistant that runs locally with a built-in MCP server: searches arXiv, PubMed, Wikipedia and more over multiple rounds and writes cited reports. Needs Python 3.12+, uv and an LLM (local Ollama or an API key); web search needs SearXNG or similar. Runs take minutes to half an hour.

Terminal tool for exploring and wrangling tabular data: opens dozens of formats including CSV, JSON, Excel and SQLite for filtering, sorting, pivots and frequency counts. --batch mode replays actions headlessly or converts file formats.

Say build a harness for this project and it designs a domain-specific agent team, generating subagent definitions, companion skills and orchestration, validates them and keeps evolving them from feedback. Supports workflow orchestration, persistent agent teams and subagent delegation.

Manage database schemas as code: declare the desired schema in SQL, HCL or your ORM and Atlas plans, lints and applies migrations, and can export existing databases as HCL, SQL or Mermaid ER diagrams. Supports PostgreSQL, MySQL and a dozen other databases.

Converts the output of 100+ commands such as dig, ps, ls and ifconfig, plus common file formats, into JSON so agents can parse it reliably with jq or scripts. Also usable as a Python library.

Turns Peng Sida's public research-writing notes into a skill: revises abstracts, introductions, methods and experiments of ML/CV/NLP papers from a reviewer's view, checks that each claim has experimental evidence, and runs a pre-submission self-check. Pure methodology, no API key.

Offline speech toolkit for Apple Silicon Macs: CLI text-to-speech (including Chinese and voice cloning) and speech-to-text, for voicing lessons and explainer videos or transcribing lectures and interviews, with data staying local. Needs an M-series Mac and Python 3.10+; MP3 export needs ffmpeg.

Query, modify and convert JSON, YAML, TOML, XML, CSV, HCL, INI and more with one selector syntax, editing config files in place or converting between formats, handy for agents handling structured data in scripts. A single dependency-free binary that works much like jq or yq.

Query cloud resources and SaaS APIs live with SQL: plugins map AWS, Azure, GCP, GitHub, Kubernetes and other services to tables you can select from directly, no ETL needed. A single binary with Postgres built in.

Diffusion model inference in pure C/C++: one sd-cli command runs SD, FLUX, Qwen Image, Wan and more locally to create or edit images and short videos, with Metal acceleration on Mac. No cloud needed; bring your own model weights and use a release binary or build from source.

OpenAI's official data analytics skills: data quality assessment, KPI design, metric anomaly diagnosis, dashboards and analysis reports, market sizing and notebooks. Ships with a Codex plugin; some skills depend on its runtime.

OpenAI's official Codex plugin that guides sequencing analysis from BCL/FASTQ: QC, RNA-seq differential expression, single-cell, variant calling and metagenomics, favoring nf-core and other public pipelines with reproducible run logs. Checks for local tools first. Research use only.

Creates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.

OpenAI's official Codex plugin that uses the local API of the Zotero desktop app to search your library, export BibTeX, insert citations into LaTeX or Markdown drafts, and import new references after you confirm. Requires Zotero desktop.

Consensus's official Codex plugin: uses its remote MCP to search 220 million peer-reviewed papers for literature reviews, bibliographies, research gap analysis and cited writing. Needs a Consensus sign-in; the free tier returns a limited number of results.

OpenAI's official life-science skills: 49 skills query public databases such as UniProt, ClinVar, gnomAD and AlphaFold through Python scripts, with a router skill that breaks down questions, normalizes entities and compiles sourced evidence. Written mainly for Codex.

Build with OpenAI best practices inside Codex: call the OpenAI API, build and deploy agents with the Agents SDK, create ChatGPT apps and prepare submission materials, and create API keys directly. Maintained by OpenAI; Codex only.

OpenAI's official Codex plugin for answering product and business questions with data: metric anomaly diagnosis, KPI design, market sizing, dashboards and reports, notebooks and data quality checks. Connects to data warehouses and BI tools.

OpenAI's official Codex plugin with about 50 skills that route questions to genetics, omics, pathway, protein structure, chemistry and clinical evidence sources, can split the work across parallel subagents, and synthesize sourced conclusions.

OpenAI's official Codex plugin with 18 skills to choose, design, build, test and export web charts, maps, dashboards, Gantt charts and UML, using D3, Vega-Lite and Three.js with attention to accessibility and responsiveness. Codex only.

OpenAI's official set of 18 web data visualization skills: chart selection and critique, D3, Canvas, Three.js, maps, statistical uncertainty, live dashboards, Gantt charts, UML and scrollytelling. Ships with a Codex plugin; installed alone, the plugin-level references are missing.

Turns articles, reports, papers or notes into a .pptx of full-slide images with speaker notes, in 12 styles such as lectures and thesis defenses; slide text is not editable. Needs Python 3; uses Codex's built-in image generation, or an OpenAI-compatible image API key in Claude Code.