# Tools

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Resources for ML / AI or Data analysis, Tagged `python`: 70 items.

> - ML / AI: Model training, evaluation and LLM application development.
> - Data analysis: Querying, statistical analysis, reporting and visualization.

- [MarkItDown-MCP](https://hebbmind.com/ru/mcp/markitdown-mcp.md): [MCP] From Microsoft: converts PDF, Word, Excel, PowerPoint, HTML and other files or URLs to Markdown so agents can read and search them. A single convert_to_markdown tool over STDIO or local HTTP.
- [MarkItDown](https://hebbmind.com/ru/cli/markitdown.md): [CLI] Converts PDF, Word, Excel, PowerPoint, HTML, images, audio and more into Markdown that keeps headings, lists and tables, ready for LLMs to read and analyze. Maintained by Microsoft; requires Python 3.10+.
- [Browser Use](https://hebbmind.com/ru/cli/browser-use.md): [CLI] Open-source browser agent project. Its browser-use CLI lets Claude Code, Codex and other agents drive your logged-in local Chrome with Python snippets, or connect to a cloud browser; also ships a Python agent library. The cloud browser needs an API key.
- [Scientific Agent Skills](https://hebbmind.com/ru/skill/scientific-agent-skills.md): [Skill] 166 research skills maintained by K-Dense (formerly Claude Scientific Skills), spanning bioinformatics, cheminformatics, clinical research, materials and physics, including unified access to 78 public databases such as PubChem and UniProt. Works with Claude Code, Codex and Cursor.
- [Hermes Agent](https://hebbmind.com/ru/cli/hermes-agent.md): [CLI] Self-improving agent from Nous Research with built-in memory and a learning loop that turns experience into skills. Works with any model provider; the hermes command has a terminal UI, and a gateway connects it to Telegram, Slack and more and runs scheduled tasks.
- [MCP Builder](https://hebbmind.com/ru/skill/mcp-builder.md): [Skill] Guides agents in building quality MCP servers: research the protocol and target API, design tools, implement with Python (FastMCP) or the TypeScript SDK, and write evaluation questions to test the result. Official Anthropic skill.
- [Agent SDK Dev](https://hebbmind.com/ru/plugin/agent-sdk-dev.md): [Plugin] Scaffolds a Claude Agent SDK project in Python or TypeScript interactively with /new-sdk-app, then a verifier agent checks dependencies, config and code against official best practices. Maintained by Anthropic.
- [Browser Use MCP](https://hebbmind.com/ru/mcp/browser-use-mcp.md): [MCP] Local MCP server built into Browser Use: lets agents navigate, click, type and extract page content, or hand multi-step tasks to the built-in browser agent. Bring your own OpenAI or Anthropic API key.
- [vLLM](https://hebbmind.com/ru/cli/vllm.md): [CLI] High-throughput LLM inference and serving engine: vllm serve starts an OpenAI- and Anthropic-compatible server in one command. Supports 200+ model architectures from Hugging Face, quantization and distributed inference. Aimed mainly at NVIDIA, AMD and other GPUs.
- [PaddleOCR MCP Server](https://hebbmind.com/ru/mcp/paddlepaddle-mcp-server.md): [MCP] Official PaddleOCR MCP: text recognition and layout parsing for images and PDFs (PP-OCR, PP-StructureV3, PaddleOCR-VL), returning text or Markdown. Runs inference locally, or calls the official API or a self-hosted service.
- [uv](https://hebbmind.com/ru/cli/uv.md): [CLI] Astral's extremely fast Python package and project manager written in Rust, replacing pip, pipx, poetry, pyenv and more. Supports lockfiles and multiple Python versions, and uvx runs Python tools without installing them.
- [Scrapling](https://hebbmind.com/ru/mcp/scrapling.md): [MCP] MCP server built into the adaptive Python scraping framework Scrapling: supports plain HTTP requests, browser rendering and stealth fetching, and uses CSS selectors to pass only the target content to the AI, saving tokens and filtering out prompt injection.
- [Scrapling](https://hebbmind.com/ru/cli/scrapling.md): [CLI] Adaptive web scraping framework: scrapling extract turns a page into Markdown, text or HTML in one command, with CSS selectors and browser rendering for dynamic pages, plus an MCP server (needs the ai extra). Needs Python 3.10+ and a browser install on first use.
- [Crawl4AI](https://hebbmind.com/ru/cli/crawl4ai.md): [CLI] Open-source, LLM-friendly web crawler that turns pages into clean Markdown for RAG and agents. Ships the crwl CLI and supports deep crawling and question-driven data extraction (extraction needs an LLM key). Free to self-host.
- [OpenBB Platform CLI](https://hebbmind.com/ru/cli/openbb-finance-cli.md): [CLI] Command-line edition of the open-source OpenBB investment research platform: query stock prices, financial statements, macroeconomic and other financial data from the terminal, and automate data pulls with Routine scripts. Officially maintained; some sources need API keys.
- [Docling](https://hebbmind.com/ru/cli/docling.md): [CLI] Parses PDF, DOCX, PPTX, XLSX, HTML, images and audio, recovering layout, reading order, tables and formulas, and exports Markdown, HTML or lossless JSON. Started by IBM Research, now hosted by the LF AI & Data Foundation; runs fully locally.
- [Freqtrade](https://hebbmind.com/ru/cli/freqtrade.md): [CLI] Open-source crypto trading framework: download market data, backtest and optimize strategies, and paper trade from the CLI while agents iterate on strategies. Docker recommended; strategies need Python and live trading needs exchange API keys. Backtests don't guarantee returns.
- [CLI-Anything](https://hebbmind.com/ru/cli/cli-anything.md): [CLI] From HKU's Data Intelligence Lab: plugins or skills for Claude Code, Codex and other agents generate agent-callable CLIs for apps like GIMP, Blender and LibreOffice, and the cli-hub package manager finds and installs ready-made community CLIs. Needs Python 3.10+.
- [Scanpy Single-Cell Analysis](https://hebbmind.com/ru/skill/scanpy.md): [Skill] Teaches agents standard single-cell RNA-seq analysis with Scanpy: QC, normalization, PCA/UMAP, clustering, differential expression and plots, with ready-to-run pipeline scripts and guidance on converting Seurat and other R objects to h5ad. Needs Python 3.12+; by K-Dense.
- [Statistical Analysis](https://hebbmind.com/ru/skill/statistical-analysis.md): [Skill] Guides agents to the right statistical method for research data: t-tests, ANOVA, chi-square, regression and Bayesian analysis, checking assumptions, computing effect sizes and power, and reporting results in APA format. Python-based (pingouin, statsmodels); by K-Dense.
- [Ruff](https://hebbmind.com/ru/cli/ruff.md): [CLI] Astral's extremely fast Python linter and formatter written in Rust, replacing Flake8, isort and Black, with 900+ built-in rules and auto-fix.
- [Qlib](https://hebbmind.com/ru/cli/qlib.md): [CLI] Microsoft's open-source AI quant investment research platform: the qrun command runs dataset building, model training, backtesting and evaluation from a YAML config, with many benchmark models. The official dataset is paused, so prepare market data per the README first.
- [Marker](https://hebbmind.com/ru/cli/marker.md): [CLI] Converts PDFs, images, PPTX, DOCX, XLSX, EPUB and more into Markdown, JSON or HTML, preserving tables, formulas and layout, with optional LLM help for higher accuracy. Needs Python 3.10+ and PyTorch; large-scale commercial use of the model weights needs a paid license.
- [Pyright LSP](https://hebbmind.com/ru/plugin/pyright-lsp.md): [Plugin] Connects Claude Code to the Pyright language server for static type checking and code intelligence in Python. Install pyright first with npm, pip or pipx. Official Anthropic plugin.
- [FunASR](https://hebbmind.com/ru/cli/funasr.md): [CLI] Industrial-grade open-source speech recognition toolkit from Alibaba's ModelScope, with an agent-friendly funasr command that turns audio into text, JSON or SRT subtitles in one step, with speaker diarization and timestamps. Strong on Chinese. Requires PyTorch.
- [Browser Harness](https://hebbmind.com/ru/cli/browser-harness.md): [CLI] Browser control from the browser-use team: an editable CDP connection lets agents drive the Chrome you are already using, writing missing helper functions as they go and keeping them for reuse. Also offers an MCP server. Allow remote debugging in Chrome on first use.
- [DVC](https://hebbmind.com/ru/cli/dvc.md): [CLI] Version datasets and models the way Git versions code: data lives in remote storage like S3 or GCS while versions are tracked in your Git repo. Also offers reproducible pipelines and local experiment tracking, rerunning only the steps affected by a change.
- [Skill Seekers](https://hebbmind.com/ru/cli/skill-seekers.md): [CLI] Turns 18 kinds of sources, including doc sites, GitHub repos, PDFs and videos, into skill packages for Claude and other platforms, or exports RAG chunks and vector store data. Optional MCP server, and it can call a local agent like Claude Code to enrich content. Needs Python 3.10+.
- [LLM](https://hebbmind.com/ru/cli/llm.md): [CLI] Simon Willison's LLM CLI and Python library: call OpenAI, Claude, Gemini and local models from the terminal, with conversations logged to SQLite automatically, plus embeddings, structured extraction, tool calling and a plugin system.
- [Trae Agent](https://hebbmind.com/ru/cli/trae-agent.md): [CLI] ByteDance's open-source, general software engineering agent: trae-cli edits files and runs commands from natural language, supports multiple model providers and MCP, and records full execution trajectories. Transparent design suits agent research and customization. Needs your own model API key.
- [mycli](https://hebbmind.com/ru/cli/mycli.md): [CLI] MySQL terminal client with smart autocompletion and syntax highlighting, also compatible with MariaDB and TiDB. Supports --execute and batch mode with CSV or table output, so agents can run SQL directly.
- [Datasette](https://hebbmind.com/ru/cli/datasette.md): [CLI] Publishes SQLite databases as browsable, queryable web pages and JSON APIs, with SQL queries, metadata and plugins, and deploys to Cloud Run and other platforms with datasette publish. Great for data exploration and data journalism. Needs Python 3.10+.
- [Hugging Face Skills](https://hebbmind.com/ru/skill/huggingface-skills.md): [Skill] Hugging Face's official skills: manage Hub models and datasets with the hf CLI, fine-tune language and vision models, run model evaluations, and build Gradio apps deployed to Spaces. Needs an HF account; cloud training on HF Jobs requires a paid plan.
- [pdfplumber](https://hebbmind.com/ru/cli/pdfplumber.md): [CLI] Reads the exact position of every character, line and table cell in digital PDFs: the CLI exports layout-preserving text or CSV/JSON details, and the Python API extracts tables and form fields, ideal for invoices, statements and reports. Runs locally with Python; scans need OCR first.
- [SQLFluff](https://hebbmind.com/ru/cli/sqlfluff.md): [CLI] Linter and formatter for 20+ SQL dialects that auto-fixes most issues and handles Jinja templating and dbt projects (dbt needs a plugin), suited to warehouse code review and CI.
- [PaperQA2](https://hebbmind.com/ru/cli/paper-qa.md): [CLI] High-accuracy retrieval-augmented Q&A over paper PDFs, text and Office documents, filling in citation metadata, checking retractions and attaching traceable sources to answers. Provides the pqa CLI and a Python library. Needs an LLM API key by default; local models can be configured.
- [VisiData](https://hebbmind.com/ru/cli/visidata.md): [CLI] Terminal tool for exploring and wrangling tabular data: opens dozens of formats including CSV, JSON, Excel and SQLite for filtering, sorting, pivots and frequency counts. --batch mode replays actions headlessly or converts file formats.
- [Scientific Figure Making](https://hebbmind.com/ru/skill/scientific-figure-making.md): [Skill] Publication-quality matplotlib plotting skill from a Yale PhD student: bar charts, trends, heatmaps and multi-panel figures with consistent fonts, colors and export settings, plus real plotting scripts from papers published in venues like Nature Machine Intelligence. Needs Python.
- [MLX-Audio](https://hebbmind.com/ru/cli/mlx-audio.md): [CLI] Offline speech toolkit for Apple Silicon Macs: CLI text-to-speech (including Chinese and voice cloning) and speech-to-text, for voicing lessons and explainer videos or transcribing lectures and interviews, with data staying local. Needs an M-series Mac and Python 3.10+; MP3 export needs ffmpeg.
- [OpenCompass](https://hebbmind.com/ru/cli/opencompass.md): [CLI] Open-source LLM evaluation platform: one opencompass command picks the model and datasets and runs the evaluation across hundreds of benchmarks. Works with local Hugging Face models and API models, with vLLM and LMDeploy for faster inference.
- [Jupyter Notebooks](https://hebbmind.com/ru/skill/jupyter-notebook.md): [Skill] Creates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.
- [Life Science Research](https://hebbmind.com/ru/skill/openai-skills-5.md): [Skill] OpenAI's official life-science skills: 49 skills query public databases such as UniProt, ClinVar, gnomAD and AlphaFold through Python scripts, with a router skill that breaks down questions, normalizes entities and compiles sourced evidence. Written mainly for Codex.
- [Trafilatura](https://hebbmind.com/ru/cli/trafilatura.md): [CLI] Python library and CLI for extracting main web content: fetches pages, crawls via sitemaps and RSS feeds, strips headers, footers and other noise, and outputs TXT, Markdown, JSON, XML and more with metadata. Also processes downloaded HTML offline.
- [csvkit](https://hebbmind.com/ru/cli/csvkit.md): [CLI] Veteran suite of CSV command-line tools: in2csv converts Excel and JSON to CSV, csvcut, csvgrep and csvsort filter and sort, csvstat computes statistics, and csvsql runs SQL directly against CSV files.
- [Excel MCP Server](https://hebbmind.com/ru/mcp/excel-mcp-server.md): [MCP] Create, read and modify xlsx workbooks without Microsoft Excel installed: formulas, formatting and conditional formatting, charts, pivot tables and tables. Runs locally over stdio or as a remote HTTP service.
- [AiPy](https://hebbmind.com/ru/cli/aipyapp.md): [CLI] Knownsec's open-source Python-use agent: describe a task in plain language and it writes and runs Python on your machine, e.g. tidying Excel files, summarizing attendance or screening resumes. Needs Python 3.11+ and a model API key such as DeepSeek; code runs locally, so back up important files.
- [Hugging Face CLI](https://hebbmind.com/ru/cli/huggingface-hub.md): [CLI] Hugging Face's official hf CLI: search, download and upload models and datasets, manage repos and storage buckets, and run jobs on Hugging Face's cloud. Output adapts automatically for agents, and hf skills add installs companion skills. Uploads and similar actions need a login.
- [Camelot](https://hebbmind.com/ru/cli/camelot.md): [CLI] Open-source PDF table extraction with a camelot CLI: exports tables from financial reports, bank statements and statistical reports to Excel, CSV or Markdown, with an accuracy score. Needs Python 3.10+; handles text-based PDFs by default, scans need the ml and ocr extras. Double-check results.
- [SQLMesh](https://hebbmind.com/ru/cli/sqlmesh.md): [CLI] Framework for writing data transformation models in SQL or Python, with a Terraform-like plan/apply flow, virtual data environments, unit tests and table diffs, and transpilation across 10+ SQL dialects. A Linux Foundation project and an alternative to dbt.
- [Paper Search MCP](https://hebbmind.com/ru/mcp/paper-search-mcp.md): [MCP] Unified search across 20+ academic sources including arXiv, PubMed, bioRxiv, Semantic Scholar and OpenAlex, returning deduplicated, normalized results and downloading full text via open-access channels first. Most sources need no API key.

Next page: https://hebbmind.com/ru/tools.md?page=2&profession=algorithm%2Cdata&tag=python
