# Tools

> Every listed resource, editors’ picks first. The filters below can be combined.

- Search: append `?q=<keywords>` to the URL. Separate several keywords with spaces; all of them must match. Matches name, repository, tags, professions, description and README.
- Filter by type: append `?type=<cli|skill|plugin|mcp>` to the URL.
- Filter by profession: append `?profession=<profession id>` to the URL. Separate several ids with commas; a resource matches when it suits any of them. Ids are listed at https://hebbmind.com/api/v1/professions
- Filter by tag: append `?tag=<tag>` to the URL. Separate several tags with commas; a resource must carry all of them. Tags are listed at https://hebbmind.com/api/v1/tags

Resources for Full-stack / Indie or DevOps / SRE or ML / AI or Data analysis or Research / Academia: 965 items.

> - Full-stack / Indie: General software work: coding-agent workflows, code review, debugging and Git collaboration.
> - DevOps / SRE: Deployment, monitoring, cloud resources and reliability.
> - ML / AI: Model training, evaluation and LLM application development.
> - Data analysis: Querying, statistical analysis, reporting and visualization.
> - Research / Academia: Literature search and reviews, experimental data analysis, paper writing and submission.

- [Shopify CLI](https://hebbmind.com/cli/shopify-cli.md): [CLI] Shopify's official CLI: scaffold, develop locally and deploy Shopify apps, extensions, Functions and themes, and build and host Hydrogen custom storefronts. Requires Node.js.
- [Oh My Paper](https://hebbmind.com/plugin/oh-my-paper.md): [Plugin] A research plugin for Claude Code: commands like /omp:survey, /omp:experiment and /omp:write chain literature review, topic selection, experiments, writing and self-review, with 5 specialized agents and 34 research skills that remember project progress across sessions. Experiments lean toward ML.
- [dbt Agent Skills](https://hebbmind.com/plugin/dbt-agent-skills.md): [Plugin] dbt Labs' official plugin marketplace with dbt and dbt-migration plugins: write models and unit tests, build semantic-layer metrics, govern with dbt Mesh, debug failed jobs, and handle version upgrades and cross-platform migrations. Most skills need an existing dbt project.
- [dbt Agent Skills](https://hebbmind.com/skill/dbt-agent-skills.md): [Skill] dbt Labs' official skills: write and edit dbt models, add unit tests and docs, set up the MetricFlow semantic layer, debug failed jobs, and handle dbt version upgrades and cross-platform migrations. Most skills need dbt installed and an existing project.
- [The Elements of Agent Style](https://hebbmind.com/skill/agent-style.md): [Skill] 21 English writing rules (12 from The Elements of Style, Orwell, Pinker and other classics, 9 from observed LLM habits) for clearer, leaner papers, grant proposals, design docs and documentation. Expository English only; not for fiction or marketing copy.
- [MaverickMCP](https://hebbmind.com/mcp/maverick-mcp.md): [MCP] Stock analysis MCP for individual investors: quotes via yfinance, technical indicators such as RSI and MACD, screening strategies, a portfolio tracker and a trade journal. Core tools need no API key; backtesting and deep-research extensions are optional.
- [Paper Lifecycle](https://hebbmind.com/skill/paper-lifecycle.md): [Skill] Two skills for before and after peer review: review-revision checks a manuscript as a senior reviewer would and plans section-by-section revisions; rebuttal-response triages reviewer comments, plans extra evidence and drafts point-by-point replies. Takes PDF, LaTeX, Word or Markdown.
- [PaperOrchestra](https://hebbmind.com/skill/paperorchestra.md): [Skill] The five-agent PaperOrchestra pipeline (outline, figures, literature review, section writing, polishing) as skills: turns research ideas, experiment logs and a conference template into a LaTeX paper and checks citations via Semantic Scholar. Needs Python; verify the draft yourself.
- [GeoSQL](https://hebbmind.com/skill/geosql.md): [Skill] Helps agents write geospatial SQL for PostGIS, DuckDB, BigQuery and Snowflake: inspect schemas and keep query costs in check, then render results as interactive maps to review and correct. Needs Python and your own database or warehouse; maps use Dekart, which can run locally in Docker.
- [latexdiff](https://hebbmind.com/cli/latexdiff.md): [CLI] Compares two versions of a LaTeX manuscript and produces a .tex that marks additions and deletions in color and strikethrough; compile it for a tracked-changes PDF to show reviewers, or diff versions from Git history. Ships with TeX Live and MiKTeX; needs Perl.
- [Econ Writing Skill](https://hebbmind.com/skill/econ-writing-skill.md): [Skill] Economics writing skill built on 50+ guides (Cochrane, McCloskey and others): shapes abstracts, introductions and conclusions by paper type and 13 identification strategies such as DiD, IV and RDD, simulates three referee scores and flags citations to verify.
- [SonarQube MCP Server](https://hebbmind.com/mcp/sonarqube-mcp-server.md): [MCP] Official SonarSource server: connects to SonarQube Server or Cloud so agents can query code issues, quality gates, security hotspots and dependency risks, and analyze file contents directly. Needs a SonarQube token; Docker is the recommended way to run it.
- [BioMCP](https://hebbmind.com/mcp/biomcp.md): [MCP] Searches about 30 biomedical sources, including PubMed, ClinicalTrials.gov, ClinVar and OncoKB, with one command syntax, covering literature, clinical trials, genetic variants, drugs and pathways. Ships as both a CLI and an MCP server.
- [Firecrawl](https://hebbmind.com/skill/firecrawl.md): [Skill] Official Firecrawl skill: drives the Firecrawl CLI to search, scrape, map site URLs, batch-crawl, interact with pages and monitor changes, returning LLM-ready Markdown. Search and scrape have a rate-limited free tier; crawling and monitoring need an account or self-hosted instance.
- [Firecrawl CLI](https://hebbmind.com/cli/firecrawl-cli.md): [CLI] Firecrawl's official CLI: scrape, search, map and crawl sites and interact with pages in a browser from the terminal, with Markdown output; can also install companion skills for coding agents. Needs a Firecrawl account or API key, or point it at a self-hosted instance.
- [Neon MCP Server](https://hebbmind.com/mcp/mcp-server-neon.md): [MCP] Manage Postgres databases on Neon in natural language: create projects and branches, run SQL, and use branches for migrations and query tuning. Remote server hosted by Neon with OAuth or API key auth and a read-only mode; Neon recommends it for development only.
- [Knowledge Absorber](https://hebbmind.com/skill/studyanalysis-skills.md): [Skill] Turns web pages, long PDFs, Word files, images or code into tutor-style study notes: Markdown notes plus searchable HTML knowledge cards with concept breakdowns and mind maps. Needs Python 3.8+, plus Chrome for some sites; the optional tutor chat needs an OpenAI-compatible API key.
- [MCP Mermaid](https://hebbmind.com/mcp/mcp-mermaid.md): [MCP] Generates flowcharts, sequence diagrams, class diagrams and other charts from Mermaid syntax with configurable theme and background, exporting SVG or PNG files or a mermaid.ink share link. Validates syntax so the model can fix errors over several turns.
- [Redis MCP Server](https://hebbmind.com/mcp/mcp-redis.md): [MCP] Redis's official MCP server: read and write strings, hashes, lists, streams, JSON and other data structures in natural language, with vector indexing and search and pub/sub. Bring your own Redis instance; runs via uvx.
- [Cloud Run MCP Server](https://hebbmind.com/mcp/cloud-run-mcp.md): [MCP] Lets agents deploy a local folder or file contents straight to Google Cloud Run, list services and view their details and logs, and list or create GCP projects. Maintained by Google; sign in with gcloud and set up Application Default Credentials first.
- [BioRender](https://hebbmind.com/plugin/biorender.md): [Plugin] Official BioRender plugin in Anthropic's life sciences marketplace: connects Claude Code to BioRender's scientific icons, templates and figures to find assets and make paper figures, lecture slides and talk graphics. Needs a free BioRender account; authorize it in /plugin after installing.
- [Railway CLI](https://hebbmind.com/cli/railwayapp-cli.md): [CLI] Railway's official CLI: deploy with railway up and manage infrastructure config, with token auth for non-interactive CI runs. The installer can set up the Railway skill and MCP for Claude Code, Codex and others in one step. Needs a Railway account.
- [Life Sciences](https://hebbmind.com/plugin/life-sciences.md): [Plugin] Anthropic's official life sciences plugin marketplace: install MCP plugins such as PubMed, BioRender, Synapse, ChEMBL and 10x Genomics, plus research skills for single-cell RNA QC, Nextflow pipelines and scvi-tools. Some data sources need an account or subscription.
- [PubMed](https://hebbmind.com/plugin/pubmed.md): [Plugin] PubMed plugin from Anthropic's life sciences marketplace: connects to the US National Library of Medicine's remote MCP to search biomedical literature and research papers. No account needed.
- [Scientific Problem Selection](https://hebbmind.com/skill/scientific-problem-selection.md): [Skill] Anthropic's official research skill built on Fischbach and Walsh's problem-selection framework (Cell): a conversational guide to refining project ideas, assessing risk and success criteria, unblocking stalled research and choosing directions. No setup or account needed.
- [Wiley Scholar Gateway](https://hebbmind.com/plugin/wiley-scholar-gateway.md): [Plugin] Plugin from Wiley in Anthropic's life sciences marketplace: connects the Scholar Gateway remote MCP for semantic search across Wiley's peer-reviewed journals, with answers carrying checkable citations and DOI links. Good for literature reviews. Needs a free Scholar Gateway account.
- [YouTube Notetaker](https://hebbmind.com/plugin/youtube-notetaker.md): [Plugin] DAIR.AI learning plugin that turns YouTube lectures and talks into local study material: extracts slide frames, builds timestamped transcripts, and lets you take notes and review in a bundled web viewer. Needs Python, yt-dlp and ffmpeg.
- [Shopify AI Toolkit](https://hebbmind.com/plugin/shopify-ai-toolkit.md): [Plugin] Shopify's official agent plugin: searches Shopify docs and API schemas, validates GraphQL, Liquid and UI extension code, and can manage stores through the Shopify CLI. Sends usage telemetry by default; it can be turned off.
- [dbt MCP Server](https://hebbmind.com/mcp/dbt-mcp.md): [MCP] Lets agents read dbt project models, lineage and Semantic Layer metrics, run build, run and test commands, and call the dbt platform Discovery and Admin APIs. Maintained by dbt Labs; Semantic Layer and platform tools need a dbt platform account.
- [DuckDB Skills](https://hebbmind.com/skill/duckdb-skills.md): [Skill] Official DuckDB skills: query local or S3 CSV, Parquet, Excel and JSON files with SQL or plain language, attach databases, convert formats, analyze spatial data and look up documentation. Needs the DuckDB CLI; tested only on macOS and Linux.
- [The Elements of Style](https://hebbmind.com/plugin/the-elements-of-style.md): [Plugin] Turns Strunk's The Elements of Style (1918) into a writing skill so agents write docs, commit messages and error messages clearly and concisely. The full text (about 12k tokens) loads only when needed. By the author of Superpowers.
- [Chroma MCP Server](https://hebbmind.com/mcp/chroma-mcp.md): [MCP] Chroma's official MCP: lets agents create and manage collections, add documents, and retrieve them with vector search, full-text search and metadata filters. Connects to in-memory or local persistent stores, self-hosted instances or Chroma Cloud.
- [Elastic Agent Skills](https://hebbmind.com/skill/elastic-agent-skills.md): [Skill] Elastic's official skills teaching agents to use Elasticsearch and Kibana correctly: index design, ES|QL queries, search relevance tuning, dashboards, observability troubleshooting and security alert triage. Currently a technical preview.
- [REUSE Tool](https://hebbmind.com/cli/reuse-tool.md): [CLI] Official FSFE command-line tool that checks every file in a project for copyright and license information per the REUSE spec, adds headers in bulk, downloads license texts and generates an SPDX bill of materials. Needs Python; have legal review the results.
- [Docker Skills](https://hebbmind.com/skill/docker-skills.md): [Skill] Official Docker skills: containerize projects, optimize and harden Dockerfile builds, orchestrate with Compose, use Docker Sandboxes and Docker Agent, with confirmation guardrails before deletes and other destructive actions.
- [Argo CD MCP Server](https://hebbmind.com/mcp/mcp-for-argocd.md): [MCP] Manage Argo CD in natural language: list and inspect applications, create, update and delete them and trigger syncs, and view resource trees, workload logs and events. Maintained by Argo Project Labs; needs your Argo CD URL and an API token, with an optional read-only mode.
- [mcp-pandoc](https://hebbmind.com/mcp/mcp-pandoc.md): [MCP] Converts between Markdown, Word, HTML, LaTeX, EPUB and more with Pandoc, exports PDF and PPTX, and can apply a Word template for consistent styling, handy for formatting manuscripts and handouts. Needs Pandoc and uv; PDF export also needs TeX Live.
- [Human Skill Tree](https://hebbmind.com/skill/human-skill-tree.md): [Skill] 33 cognitive-science-based tutoring skills for K-12 math and science, exam prep, university subjects, academic writing and job interviews, using Socratic questions and spaced review rather than giving answers. In Chinese and English; copy the skills folder into your agent manually.
- [ScholarAIO](https://hebbmind.com/cli/scholaraio.md): [CLI] Research workbench that turns paper PDFs into a searchable library so Claude Code or Codex can find and close-read papers, draft reviews and manuscripts, answer reviewer comments and check citations. Imports from Zotero and EndNote. Needs Python 3.10+; an LLM API key is optional.
- [Resend MCP Server](https://hebbmind.com/mcp/resend-mcp.md): [MCP] Resend's official MCP: lets agents send and receive email and manage contacts, broadcasts and sending domains. Use the hosted remote server with OAuth sign-in, or run the npm package locally with a Resend API key.
- [Learn This (Tapestry Skills)](https://hebbmind.com/skill/learn-this.md): [Skill] Give it a YouTube video, web article or PDF link and it extracts the transcript or text, then builds a five-round Ship-Learn-Next action plan saved as Markdown, for self-study. Needs CLI tools such as yt-dlp and pdftotext; videos default to English subtitles.
- [ClickHouse Agent Skills](https://hebbmind.com/skill/clickhouse-agent-skills.md): [Skill] Official ClickHouse skills: best practices for schema design, primary keys, JOINs and inserts ranked by impact, advice on real-time architecture decisions, in-process SQL and pandas-compatible analysis with chDB, and local and cloud deployment workflows.
- [YouTube MCP Server](https://hebbmind.com/mcp/mcp-youtube.md): [MCP] Uses yt-dlp to pull YouTube subtitles into the agent, so asking it to summarize a video gets you the key points; handy for teachers prepping lessons, researchers and creators. No API key, but needs yt-dlp (Homebrew or WinGet) and Node.js.
- [Google Security Operations and Threat Intelligence MCP Server](https://hebbmind.com/mcp/mcp-security.md): [MCP] Google's official security MCP servers for Google SecOps (Chronicle), SecOps SOAR, Google Threat Intelligence and Security Command Center: investigate alerts, hunt threats, look up IOCs and review cloud risks. Needs Google Cloud credentials or a VirusTotal API key.
- [lean-lsp-mcp](https://hebbmind.com/mcp/lean-lsp-mcp.md): [MCP] MCP server for the Lean 4 theorem prover: lets agents read proof goals, diagnostics and definitions and search theorems via LeanSearch and Loogle, helping mathematicians and students with formal proofs. Needs uv and the Lean toolchain; run it from the Lean project root.
- [Claude Code LSPs](https://hebbmind.com/plugin/claude-code-lsps.md): [Plugin] Third-party LSP plugin marketplace with 30+ language server plugins, including TypeScript, Python, Rust, Go, Java, C/C++, Vue, Svelte, Elixir and Haskell, covering more languages than the official set. Requires Claude Code 2.1.50+; install the language servers yourself.
- [Prometheus MCP Server](https://hebbmind.com/mcp/prometheus-mcp-server.md): [MCP] Lets agents query Prometheus metrics with PromQL and browse metric metadata and scrape targets to help investigate alerts and performance issues. Supports basic auth, bearer tokens and multi-tenancy; Docker is the recommended way to run it.
- [Academic Writing Skills](https://hebbmind.com/skill/academic-writing-skills.md): [Skill] Post-draft polishing skills for English LaTeX papers, Chinese theses (GB/T 7714) and Typst manuscripts: compile diagnostics, format and grammar checks, reference verification, reviewer-style assessment, cover letters and defense slides. Needs Python, uv and TeX Live; academic use only.
- [Stata MCP](https://hebbmind.com/mcp/stata-mcp.md): [MCP] Connects Stata to VS Code or Cursor and exposes a local MCP endpoint so Claude Code or Codex can write and run do-files and read regression output, with graphs shown in the editor; for empirical research. Needs a licensed Stata 17+, the extension installed and the editor open.
- [ElevenLabs Skills](https://hebbmind.com/skill/elevenlabs-skills.md): [Skill] Official ElevenLabs skills: text to speech, speech to text, sound effects and music generation, voice changing, vocal isolation, multilingual dubbing and building voice agents. Needs an ElevenLabs API key.

Next page: https://hebbmind.com/tools.md?page=17&profession=fullstack%2Cdevops%2Calgorithm%2Cdata%2Cresearch
