# Tools

> Every listed resource, editors’ picks first. The filters below can be combined.

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Resources for DevOps / SRE or ML / AI or Data engineering or Data analysis or Research / Academia: 650 items.

> - DevOps / SRE: Deployment, monitoring, cloud resources and reliability.
> - ML / AI: Model training, evaluation and LLM application development.
> - Data engineering: Data pipelines, warehouse modeling, ETL and data quality.
> - Data analysis: Querying, statistical analysis, reporting and visualization.
> - Research / Academia: Literature search and reviews, experimental data analysis, paper writing and submission.

- [Amazon EKS MCP Server](https://hebbmind.com/mcp/eks-mcp-server.md): [MCP] Official AWS MCP to create and manage EKS clusters, deploy apps, manage Kubernetes resources, and read pod logs and events for troubleshooting. Read-only by default; writes need --allow-write and reading logs needs --allow-sensitive-data-access.
- [AWS IaC MCP Server](https://hebbmind.com/mcp/aws-iac-mcp-server.md): [MCP] Official AWS MCP that validates CloudFormation templates for syntax and security compliance, diagnoses deployment failures, and searches CloudFormation and CDK docs, code samples and best practices. Replaces the deprecated Cloud Control API server; needs AWS credentials.
- [Defuddle](https://hebbmind.com/cli/defuddle.md): [CLI] Extracts the main content of a web page, stripping comments, sidebars, headers and footers, and outputs clean HTML or Markdown with metadata like title, author and publish date, saving tokens when agents read the web. Built for Obsidian Web Clipper by kepano; still in development.
- [BabelDOC](https://hebbmind.com/cli/babeldoc.md): [CLI] PDF translation CLI for research papers that preserves formulas and layout as much as possible, producing bilingual side-by-side or translation-only PDFs. Needs an OpenAI-compatible API (local Ollama works too); currently focused on English to Chinese.
- [Apache SeaTunnel](https://hebbmind.com/cli/seatunnel.md): [CLI] Distributed data integration tool and Apache top-level project with 160+ connectors for batch, real-time and CDC sync. Define jobs in config files and run them on the built-in Zeta engine or on Flink or Spark. Requires Java.
- [garak](https://hebbmind.com/cli/garak.md): [CLI] NVIDIA's open-source LLM vulnerability scanner that probes for prompt injection, jailbreaks, data leakage, hallucination and harmful content, supporting OpenAI, Hugging Face, Bedrock and most REST-accessible models. Scanning cloud models needs their API keys.
- [PaperQA2](https://hebbmind.com/cli/paper-qa.md): [CLI] High-accuracy retrieval-augmented Q&A over paper PDFs, text and Office documents, filling in citation metadata, checking retractions and attaching traceable sources to answers. Provides the pqa CLI and a Python library. Needs an LLM API key by default; local models can be configured.
- [VisiData](https://hebbmind.com/cli/visidata.md): [CLI] Terminal tool for exploring and wrangling tabular data: opens dozens of formats including CSV, JSON, Excel and SQLite for filtering, sorting, pivots and frequency counts. --batch mode replays actions headlessly or converts file formats.
- [Local Deep Research](https://hebbmind.com/mcp/local-deep-research.md): [MCP] Deep research assistant that runs locally with a built-in MCP server: searches arXiv, PubMed, Wikipedia and more over multiple rounds and writes cited reports. Needs Python 3.12+, uv and an LLM (local Ollama or an API key); web search needs SearXNG or similar. Runs take minutes to half an hour.
- [Harness](https://hebbmind.com/plugin/harness.md): [Plugin] Say build a harness for this project and it designs a domain-specific agent team, generating subagent definitions, companion skills and orchestration, validates them and keeps evolving them from feedback. Supports workflow orchestration, persistent agent teams and subagent delegation.
- [Checkov](https://hebbmind.com/cli/checkov.md): [CLI] Static scanner for security and compliance issues in Terraform, CloudFormation, Kubernetes, Helm, Dockerfiles and CI pipeline configs, with over a thousand built-in policies and hard-coded secret detection. Outputs SARIF, JSON and more. Maintained by Prisma Cloud.
- [Scientific Figure Making](https://hebbmind.com/skill/scientific-figure-making.md): [Skill] Publication-quality matplotlib plotting skill from a Yale PhD student: bar charts, trends, heatmaps and multi-panel figures with consistent fonts, colors and export settings, plus real plotting scripts from papers published in venues like Nature Machine Intelligence. Needs Python.
- [Atlas](https://hebbmind.com/cli/atlas.md): [CLI] Manage database schemas as code: declare the desired schema in SQL, HCL or your ORM and Atlas plans, lints and applies migrations, and can export existing databases as HCL, SQL or Mermaid ER diagrams. Supports PostgreSQL, MySQL and a dozen other databases.
- [jc](https://hebbmind.com/cli/jc.md): [CLI] Converts the output of 100+ commands such as dig, ps, ls and ifconfig, plus common file formats, into JSON so agents can parse it reliably with jq or scripts. Also usable as a Python library.
- [NextTrace](https://hebbmind.com/cli/ntrace-core.md): [CLI] Open-source visual traceroute that shows IP geolocation, AS number and carrier for every hop, with continuous MTR probing and JSON output; the full edition can also be deployed as an MCP server.
- [MLX-Audio](https://hebbmind.com/cli/mlx-audio.md): [CLI] Offline speech toolkit for Apple Silicon Macs: CLI text-to-speech (including Chinese and voice cloning) and speech-to-text, for voicing lessons and explainer videos or transcribing lectures and interviews, with data staying local. Needs an M-series Mac and Python 3.10+; MP3 export needs ffmpeg.
- [dasel](https://hebbmind.com/cli/dasel.md): [CLI] Query, modify and convert JSON, YAML, TOML, XML, CSV, HCL, INI and more with one selector syntax, editing config files in place or converting between formats, handy for agents handling structured data in scripts. A single dependency-free binary that works much like jq or yq.
- [App Store Connect CLI](https://hebbmind.com/cli/app-store-connect-cli.md): [CLI] asc CLI for scripting the App Store Connect API: manage builds, TestFlight, metadata, signing and review submissions to automate iOS and macOS releases from the terminal or CI. Ships with a companion agent skill pack. Needs an App Store Connect API key.
- [Steampipe](https://hebbmind.com/cli/steampipe.md): [CLI] Query cloud resources and SaaS APIs live with SQL: plugins map AWS, Azure, GCP, GitHub, Kubernetes and other services to tables you can select from directly, no ETL needed. A single binary with Postgres built in.
- [stable-diffusion.cpp](https://hebbmind.com/cli/stable-diffusion-cpp.md): [CLI] Diffusion model inference in pure C/C++: one sd-cli command runs SD, FLUX, Qwen Image, Wan and more locally to create or edit images and short videos, with Metal acceleration on Mac. No cloud needed; bring your own model weights and use a release binary or build from source.
- [Supply Chain Risk Auditor](https://hebbmind.com/skill/supply-chain-risk-auditor.md): [Skill] Trail of Bits skill that audits npm, PyPI and Go supply-chain risk: known advisories across direct deps and the whole lockfile tree, deprecated or archived upstreams, npm publisher concentration and install-time scripts. Needs uv; a logged-in gh is recommended.
- [Research Paper Writing Skills](https://hebbmind.com/skill/research-paper-writing-skills.md): [Skill] Turns Peng Sida's public research-writing notes into a skill: revises abstracts, introductions, methods and experiments of ML/CV/NLP papers from a reviewer's view, checks that each claim has experimental evidence, and runs a pre-submission self-check. Pure methodology, no API key.
- [Agentic Actions Auditor](https://hebbmind.com/skill/agentic-actions-auditor.md): [Skill] Trail of Bits skill that audits GitHub Actions workflows wired to AI coding agents (Claude Code Action, Codex, Gemini CLI and others) for prompt injection, env-variable relays, dangerous sandbox settings, wildcard allowlists and other privilege risks.
- [Static Analysis](https://hebbmind.com/skill/static-analysis.md): [Skill] Trail of Bits static analysis skills: CodeQL for interprocedural taint tracking and data-flow analysis, Semgrep for rule-based scanning, plus parsing and deduplicating SARIF results. Requires CodeQL or Semgrep installed locally.
- [Firecrawl MCP Server](https://hebbmind.com/mcp/firecrawl-mcp-server.md): [MCP] Scrapes web pages into Markdown or structured data, with full-site crawling, sitemaps, web search and interaction with dynamic pages. Maintained by Firecrawl; the cloud needs an API key (self-hosting is possible), and the keyless hosted endpoint only offers scrape, search and parse.
- [kubectl-ai](https://hebbmind.com/cli/kubectl-ai.md): [CLI] Manage Kubernetes clusters in natural language: translates intent into kubectl operations and runs them, and can serve as an MCP server for other agents. Uses Gemini by default (API key required) and also supports OpenAI and local models. Maintained by Google Cloud.
- [OpenAI Developers](https://hebbmind.com/plugin/openai-developers.md): [Plugin] Build with OpenAI best practices inside Codex: call the OpenAI API, build and deploy agents with the Agents SDK, create ChatGPT apps and prepare submission materials, and create API keys directly. Maintained by OpenAI; Codex only.
- [Consensus](https://hebbmind.com/plugin/consensus.md): [Plugin] Consensus's official Codex plugin: uses its remote MCP to search 220 million peer-reviewed papers for literature reviews, bibliographies, research gap analysis and cited writing. Needs a Consensus sign-in; the free tier returns a limited number of results.
- [Data Analytics](https://hebbmind.com/plugin/data-analytics.md): [Plugin] OpenAI's official Codex plugin for answering product and business questions with data: metric anomaly diagnosis, KPI design, market sizing, dashboards and reports, notebooks and data quality checks. Connects to data warehouses and BI tools.
- [Build Web Data Visualization](https://hebbmind.com/skill/openai-openai-skills.md): [Skill] OpenAI's official set of 18 web data visualization skills: chart selection and critique, D3, Canvas, Three.js, maps, statistical uncertainty, live dashboards, Gantt charts, UML and scrollytelling. Ships with a Codex plugin; installed alone, the plugin-level references are missing.
- [Build Web Data Visualization](https://hebbmind.com/plugin/build-web-data-visualization.md): [Plugin] OpenAI's official Codex plugin with 18 skills to choose, design, build, test and export web charts, maps, dashboards, Gantt charts and UML, using D3, Vega-Lite and Three.js with attention to accessibility and responsiveness. Codex only.
- [Data Analytics](https://hebbmind.com/skill/openai-skills.md): [Skill] OpenAI's official data analytics skills: data quality assessment, KPI design, metric anomaly diagnosis, dashboards and analysis reports, market sizing and notebooks. Ships with a Codex plugin; some skills depend on its runtime.
- [Jupyter Notebooks](https://hebbmind.com/skill/jupyter-notebook.md): [Skill] Creates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.
- [Life Sciences NGS Analysis](https://hebbmind.com/plugin/ngs-analysis.md): [Plugin] OpenAI's official Codex plugin that guides sequencing analysis from BCL/FASTQ: QC, RNA-seq differential expression, single-cell, variant calling and metagenomics, favoring nf-core and other public pipelines with reproducible run logs. Checks for local tools first. Research use only.
- [Zotero](https://hebbmind.com/plugin/zotero.md): [Plugin] OpenAI's official Codex plugin that uses the local API of the Zotero desktop app to search your library, export BibTeX, insert citations into LaTeX or Markdown drafts, and import new references after you confirm. Requires Zotero desktop.
- [Life Science Research](https://hebbmind.com/plugin/life-science-research.md): [Plugin] OpenAI's official Codex plugin with about 50 skills that route questions to genetics, omics, pathway, protein structure, chemistry and clinical evidence sources, can split the work across parallel subagents, and synthesize sourced conclusions.
- [Life Science Research](https://hebbmind.com/skill/openai-skills-5.md): [Skill] OpenAI's official life-science skills: 49 skills query public databases such as UniProt, ClinVar, gnomAD and AlphaFold through Python scripts, with a router skill that breaks down questions, normalizes entities and compiles sourced evidence. Written mainly for Codex.
- [OpenCompass](https://hebbmind.com/cli/opencompass.md): [CLI] Open-source LLM evaluation platform: one opencompass command picks the model and datasets and runs the evaluation across hundreds of benchmarks. Works with local Hugging Face models and API models, with vLLM and LMDeploy for faster inference.
- [sd](https://hebbmind.com/cli/sd.md): [CLI] A more intuitive find-and-replace tool than sed: uses JavaScript/Python-style regex syntax, supports literal string mode and in-place file edits, which suits agents doing bulk text rewrites.
- [Jupytext](https://hebbmind.com/cli/jupytext.md): [CLI] Converts and two-way syncs Jupyter notebooks with plain Python scripts or Markdown, so agents can edit research and teaching notebooks like ordinary text and diffs stay readable. Needs a local Python environment; install with pip.
- [Codex PPT Skill](https://hebbmind.com/skill/codex-ppt-skill.md): [Skill] Turns articles, reports, papers or notes into a .pptx of full-slide images with speaker notes, in 12 styles such as lectures and thesis defenses; slide text is not editable. Needs Python 3; uses Codex's built-in image generation, or an OpenAI-compatible image API key in Claude Code.
- [arxiv-latex-cleaner](https://hebbmind.com/cli/arxiv-latex-cleaner.md): [CLI] Cleans a LaTeX project before arXiv submission: removes comments, auxiliary files and unused .tex files and images, and can compress images, so internal notes are not published with the source. From Google Research; installable with Homebrew on macOS.
- [Trafilatura](https://hebbmind.com/cli/trafilatura.md): [CLI] Python library and CLI for extracting main web content: fetches pages, crawls via sitemaps and RSS feeds, strips headers, footers and other noise, and outputs TXT, Markdown, JSON, XML and more with metadata. Also processes downloaded HTML offline.
- [zizmor](https://hebbmind.com/cli/zizmor.md): [CLI] Static security analysis for CI/CD config: finds template injection, credential leaks, excessive permissions and more in GitHub Actions workflows, also covers Dependabot and pre-commit configs, and auto-fixes some findings.
- [Summarize](https://hebbmind.com/cli/summarize.md): [CLI] One command extracts or summarizes web pages, PDFs, YouTube videos, podcasts and media files, with JSON output. Summaries can use many model APIs, local models or a logged-in Codex or Claude CLI; plain extraction needs no key. Also has a browser sidebar extension.
- [Podcastfy](https://hebbmind.com/cli/podcastfy.md): [CLI] Open-source alternative to NotebookLM's podcast feature: turns web pages, PDFs, images, YouTube videos or text into two-host conversational audio, useful for lecture notes or articles. Uses Gemini and OpenAI API keys by default, or local models plus free Edge TTS.
- [Argos Translate](https://hebbmind.com/cli/argos-translate.md): [CLI] Open-source offline machine translation built on OpenNMT, usable as a CLI, Python library or GUI. Download language packages as needed; when no direct model exists it pivots through an intermediate language. Suits text you would rather not upload to the cloud.
- [n8n Skills](https://hebbmind.com/skill/n8n-skills.md): [Skill] 14 n8n workflow skills: expression syntax, MCP tool usage, node configuration, validation and troubleshooting, Code nodes, AI Agent workflows and self-hosted n8n deployment. Meant to be used with the n8n-mcp server.
- [csvkit](https://hebbmind.com/cli/csvkit.md): [CLI] Veteran suite of CSV command-line tools: in2csv converts Excel and JSON to CSV, csvcut, csvgrep and csvsort filter and sort, csvstat computes statistics, and csvsql runs SQL directly against CSV files.
- [Lieflat Charts](https://hebbmind.com/skill/lieflat-charts.md): [Skill] Generates template-driven charts as single-file HTML: picks a chart from real Lupi, Basics, Glance, Maps and Interactive gallery implementations based on data shape, or fills one of 12 Chinese and English report templates. Defaults to Mono grayscale with semantic color presets. Written in Chinese.

Next page: https://hebbmind.com/tools.md?page=7&profession=devops%2Calgorithm%2Cdata-engineering%2Cdata%2Cresearch
