# Tools

> Every listed resource, editors’ picks first. The filters below can be combined.

- Search: append `?q=<keywords>` to the URL. Separate several keywords with spaces; all of them must match. Matches name, repository, tags, professions, description and README.
- Filter by type: append `?type=<cli|skill|plugin|mcp>` to the URL.
- Filter by profession: append `?profession=<profession id>` to the URL. Separate several ids with commas; a resource matches when it suits any of them. Ids are listed at https://hebbmind.com/api/v1/professions
- Filter by tag: append `?tag=<tag>` to the URL. Separate several tags with commas; a resource must carry all of them. Tags are listed at https://hebbmind.com/api/v1/tags

Type Skill, Resources for DevOps / SRE or ML / AI or Security or Research / Academia: 132 items.

> - DevOps / SRE: Deployment, monitoring, cloud resources and reliability.
> - ML / AI: Model training, evaluation and LLM application development.
> - Security: Code audits, vulnerability triage, penetration testing and compliance.
> - Research / Academia: Literature search and reviews, experimental data analysis, paper writing and submission.

- [PDF](https://hebbmind.com/skill/pdf.md): [Skill] Extracts text and tables from PDFs; merges, splits and rotates pages, adds watermarks, fills forms and OCRs scanned documents. The official Anthropic skill behind Claude's document features; source-available, not open source.
- [Skill Creator](https://hebbmind.com/skill/skill-creator.md): [Skill] Guides the agent through writing or improving a skill: clarify intent, draft SKILL.md, run scored evals with and without the skill, then tune the description so it triggers accurately. Official Anthropic skill.
- [Scientific Agent Skills](https://hebbmind.com/skill/scientific-agent-skills.md): [Skill] 166 research skills maintained by K-Dense (formerly Claude Scientific Skills), spanning bioinformatics, cheminformatics, clinical research, materials and physics, including unified access to 78 public databases such as PubChem and UniProt. Works with Claude Code, Codex and Cursor.
- [Trail of Bits Skills](https://hebbmind.com/skill/trailofbits-skills.md): [Skill] Skills from security firm Trail of Bits: 40+ plugins for code auditing, CodeQL and Semgrep static analysis, differential review, smart-contract and cryptography audits, fuzzing and more. Also installable as a Claude Code or Codex plugin marketplace.
- [Teach](https://hebbmind.com/skill/teach.md): [Skill] Turns the current folder into a teaching workspace you can resume across conversations: asks your learning goal, gathers reliable sources, builds short HTML lessons and cheat sheets, and tracks progress. Good for self-study and lesson prep; invoke manually (/teach), no API key.
- [Discernment Nudge](https://hebbmind.com/skill/discernment-nudge.md): [Skill] After giving advice, a draft or a data analysis, adds 2-3 targeted follow-up questions that prompt the user to check key facts, test the reasoning and fill in missing context. Fires at most once per conversation. Official Anthropic skill.
- [Claude API](https://hebbmind.com/skill/claude-api.md): [Skill] Reference for the Claude API and Anthropic SDK: model selection and pricing, streaming, tool use, prompt caching, Managed Agents and more, plus workflows for model migration and prompt audits. Official Anthropic skill.
- [MCP Builder](https://hebbmind.com/skill/mcp-builder.md): [Skill] Guides agents in building quality MCP servers: research the protocol and target API, design tools, implement with Python (FastMCP) or the TypeScript SDK, and write evaluation questions to test the result. Official Anthropic skill.
- [Archify](https://hebbmind.com/skill/archify.md): [Skill] Turns natural-language descriptions, Mermaid or a real code repo into interactive single-file HTML diagrams: architecture, flowcharts, sequence diagrams, data flows and state machines. Validates output automatically and exports PNG or SVG.
- [Scanpy Single-Cell Analysis](https://hebbmind.com/skill/scanpy.md): [Skill] Teaches agents standard single-cell RNA-seq analysis with Scanpy: QC, normalization, PCA/UMAP, clustering, differential expression and plots, with ready-to-run pipeline scripts and guidance on converting Seurat and other R objects to h5ad. Needs Python 3.12+; by K-Dense.
- [Statistical Analysis](https://hebbmind.com/skill/statistical-analysis.md): [Skill] Guides agents to the right statistical method for research data: t-tests, ANOVA, chi-square, regression and Bayesian analysis, checking assumptions, computing effect sizes and power, and reporting results in APA format. Python-based (pingouin, statsmodels); by K-Dense.
- [Literature Review (K-Dense)](https://hebbmind.com/skill/literature-review.md): [Skill] Systematic literature reviews following PRISMA and similar standards: searches PubMed, arXiv, bioRxiv and other databases, verifies each citation's DOI, and outputs Markdown and PDF in APA, Nature or other styles. Main web search uses parallel-cli and needs a Parallel account.
- [Scientific Writing (K-Dense)](https://hebbmind.com/skill/scientific-writing.md): [Skill] Drafts, revises and reviews research manuscripts, tying every fact and number to verified evidence and covering reporting guidelines, authorship, AI disclosure and confidentiality; explicitly forbids fabricated citations or data. Includes offline check scripts; no API key needed.
- [Database Lookup](https://hebbmind.com/skill/database-lookup.md): [Skill] Unified database lookup skill from K-Dense's scientific collection: reproducibly queries about 80 public database APIs such as PubChem, UniProt, ChEMBL, ClinicalTrials.gov and FRED, returning traceable results with endpoints, parameters and count checks. Some need API keys.
- [Academic Research Skills](https://hebbmind.com/skill/academic-research-skills.md): [Skill] Skill suite for the whole academic research workflow: deep research (including PRISMA systematic reviews), paper writing, multi-perspective peer review and revision, pausing for human approval at each stage, with citation and integrity checks. CC BY-NC, non-commercial only.
- [Obsidian Skills](https://hebbmind.com/skill/obsidian-skills.md): [Skill] Teaches agents to read and write Obsidian vaults: Obsidian-flavored Markdown, Bases data views, JSON Canvas and the Obsidian CLI, plus Defuddle web content extraction and Knap template rendering. Maintained by Obsidian CEO kepano.
- [Agentic Awesome Skills](https://hebbmind.com/skill/agentic-awesome-skills.md): [Skill] Collection of 2,400+ installable SKILL.md skills across development, security, cloud and ops, AI, marketing and more, with the AAS Core local MCP and an installer that help agents search, pick skills and preview install plans. Formerly antigravity-awesome-skills.
- [wshobson/agents](https://hebbmind.com/skill/wshobson-agents.md): [Skill] The 180+ skills bundled with the 90+ plugins in the wshobson/agents marketplace, covering development across many languages and frameworks, testing, ops, security, data and LLM apps. Install individually with npx skills or gh skill; skills only, without subagents or commands.
- [GDPR Data Handling](https://hebbmind.com/skill/gdpr-data-handling.md): [Skill] EU GDPR compliance skill covering lawful bases, consent management, access and deletion requests, data retention and breach notification, with checklists and sample code so legal and engineering can review privacy together. No account or API key; have a lawyer check conclusions.
- [Awesome Copilot Skills](https://hebbmind.com/skill/github-skills.md): [Skill] Community skill collection in GitHub's official repo: 400+ skills following the Agent Skills spec, covering codebase onboarding, testing, cloud and DevOps, agent security and more. Install individual skills with gh skills install.
- [Find Skills](https://hebbmind.com/skill/find-skills.md): [Skill] When a user asks whether a skill exists for some task, searches the skills.sh ecosystem with the skills CLI, then recommends and installs a fit. Maintained by Vercel Labs and shipped in the skills CLI repo.
- [book-to-skill](https://hebbmind.com/skill/book-to-skill.md): [Skill] Distills technical books, doc folders or paper collections (PDF, EPUB, DOCX, Markdown and more) into an agent skill with a core framework, on-demand chapter files, glossary and cheat sheet for lookup while working. Extraction needs local Python; poppler or docling optional for PDFs.
- [Anthropic Cybersecurity Skills](https://hebbmind.com/skill/anthropic-cybersecurity-skills.md): [Skill] Community-maintained cybersecurity skill library: 800+ skills across 34 domains including threat hunting, incident forensics, penetration testing and cloud security, mapped to MITRE ATT&CK and NIST CSF. Not by Anthropic; offensive skills are for authorized testing only.
- [Vercel Optimize](https://hebbmind.com/skill/vercel-optimize.md): [Skill] Vercel's official cost and performance skill: gathers production metrics, usage and project config, investigates only the routes and files the metrics point to, and returns ranked, doc-backed recommendations. Supports Next.js, SvelteKit and Nuxt; needs Vercel CLI v53+ logged in and linked.
- [Deploy to Vercel](https://hebbmind.com/skill/deploy-to-vercel.md): [Skill] Vercel's official deployment skill: checks the git remote, project link and CLI login, then deploys a preview (default) or production via git push or vercel deploy. When login isn't possible in a sandbox, it can create a claimable preview link.
- [Compliance Tracking](https://hebbmind.com/skill/compliance-tracking.md): [Skill] Compliance skill from Anthropic's official operations plugin: maps controls, owners and evidence for SOC 2, ISO 27001, GDPR, HIPAA and PCI DSS, schedules audits, runs gap analyses, and outputs audit-readiness checklists and evidence collection plans. Have legal or compliance experts review.
- [baoyu-translate](https://hebbmind.com/skill/baoyu-translate.md): [Skill] Translation skill by Baoyu with quick, normal and refined modes, custom glossaries, and target audience and style settings. Translates local files or URLs; suited to long-form Chinese-English translation and localization. Needs bun or npx.
- [Google Agent Skills](https://hebbmind.com/skill/google-google-skills.md): [Skill] Google's official skill library, focused on Google Cloud: 100+ skills for gcloud, Cloud Run, GKE, BigQuery, IAM, monitoring and logging, and the Well-Architected Framework, plus Ads and Analytics.
- [GKE Basics & Critical Gotchas](https://hebbmind.com/skill/gke-basics.md): [Skill] Google's official GKE basics skill: creating clusters, choosing Autopilot or Standard, getting kubectl credentials, configuring Workload Identity and deploying workloads, plus a list of common gotchas. Needs gcloud and a GCP project.
- [Agent Skills for Context Engineering](https://hebbmind.com/skill/agent-skills-for-context-engineering.md): [Skill] Context and harness engineering skills: context fundamentals, degradation diagnosis and compression, multi-agent architectures, memory systems, tool design, LLM-as-judge evaluation and self-improvement loops. Focused on principles and design patterns, not tied to any agent platform.
- [ARIS (Auto-claude-code-research-in-sleep)](https://hebbmind.com/skill/auto-claude-code-research-in-sleep.md): [Skill] Lets Claude Code push ML research forward unattended: literature review, topic selection, experiment deployment, cross-model review loops and paper writing through rebuttal, in 80+ skills. Codex acts as the independent reviewer by default; other model pairings work too.
- [Prompt Master](https://hebbmind.com/skill/prompt-master.md): [Skill] Writes precise prompts for a specific AI tool: identifies the target tool, extracts your intent, asks at most three questions if details are missing, then outputs a lean, paste-ready prompt. Covers dozens of tools including ChatGPT, Claude Code, Cursor, Midjourney and Sora.
- [AI Research Skills](https://hebbmind.com/skill/ai-research-skills.md): [Skill] Nearly 100 skills spanning the AI research workflow: ideation and literature review, fine-tuning and post-training, distributed training, inference serving, evaluation, interpretability and paper writing, tied together by an autoresearch orchestration skill.
- [Hugging Face LLM Trainer](https://hebbmind.com/skill/huggingface-llm-trainer.md): [Skill] Lets agents fine-tune language and vision models with TRL or Unsloth on Hugging Face Jobs cloud GPUs, supporting SFT, DPO, GRPO and reward models, and convert results to GGUF for local use. Requires an HF Pro or higher paid plan. Maintained by Hugging Face.
- [Hugging Face CLI (hf-cli)](https://hebbmind.com/skill/hf-cli.md): [Skill] Teaches agents the Hugging Face Hub CLI hf: search and download models, manage datasets, Spaces, Buckets and repos, and run Jobs and inference endpoints. The skill content is generated from your local CLI, so install hf first. Maintained by Hugging Face.
- [Hugging Face Skills](https://hebbmind.com/skill/huggingface-skills.md): [Skill] Hugging Face's official skills: manage Hub models and datasets with the hf CLI, fine-tune language and vision models, run model evaluations, and build Gradio apps deployed to Spaces. Needs an HF account; cloud training on HF Jobs requires a paid plan.
- [Supervisor-Skills](https://hebbmind.com/skill/supervisor-skills.md): [Skill] Twelve research skills from Prof. Yuyu Luo's team at HKUST (Guangzhou), built on a decade of top-venue publishing and reviewing: idea evaluation, intro and body writing, polishing, surveys, pre-submission review, figures, Draw.io rebuilds and rebuttals. Non-commercial license.
- [drawio-skill](https://hebbmind.com/skill/drawio-skill.md): [Skill] Generates editable draw.io architecture diagrams, ER diagrams, UML and BPMN flows from natural language or from Terraform, SQL DDL, OpenAPI specs and code repos, with incremental sync and multi-format export. Native export needs the draw.io desktop app.
- [Scientific Figure Making](https://hebbmind.com/skill/scientific-figure-making.md): [Skill] Publication-quality matplotlib plotting skill from a Yale PhD student: bar charts, trends, heatmaps and multi-panel figures with consistent fonts, colors and export settings, plus real plotting scripts from papers published in venues like Nature Machine Intelligence. Needs Python.
- [Static Analysis](https://hebbmind.com/skill/static-analysis.md): [Skill] Trail of Bits static analysis skills: CodeQL for interprocedural taint tracking and data-flow analysis, Semgrep for rule-based scanning, plus parsing and deduplicating SARIF results. Requires CodeQL or Semgrep installed locally.
- [Variant Analysis](https://hebbmind.com/skill/variant-analysis.md): [Skill] From Trail of Bits: starts from one confirmed vulnerability, distills its root cause, then writes and progressively generalizes CodeQL/Semgrep queries to find similar variants across the codebase and report them by severity.
- [Agentic Actions Auditor](https://hebbmind.com/skill/agentic-actions-auditor.md): [Skill] Trail of Bits skill that audits GitHub Actions workflows wired to AI coding agents (Claude Code Action, Codex, Gemini CLI and others) for prompt injection, env-variable relays, dangerous sandbox settings, wildcard allowlists and other privilege risks.
- [Research Paper Writing Skills](https://hebbmind.com/skill/research-paper-writing-skills.md): [Skill] Turns Peng Sida's public research-writing notes into a skill: revises abstracts, introductions, methods and experiments of ML/CV/NLP papers from a reviewer's view, checks that each claim has experimental evidence, and runs a pre-submission self-check. Pure methodology, no API key.
- [Differential Review](https://hebbmind.com/skill/differential-review.md): [Skill] From Trail of Bits: reviews PRs, commits or diffs from a security angle, tracing history with git blame, estimating blast radius by caller count and checking test coverage gaps, then writes a Markdown review report.
- [Supply Chain Risk Auditor](https://hebbmind.com/skill/supply-chain-risk-auditor.md): [Skill] Trail of Bits skill that audits npm, PyPI and Go supply-chain risk: known advisories across direct deps and the whole lockfile tree, deprecated or archived upstreams, npm publisher concentration and install-time scripts. Needs uv; a logged-in gh is recommended.
- [Defending Code Reference Harness](https://hebbmind.com/skill/defending-code-reference-harness.md): [Skill] Anthropic's reference implementation for finding and fixing vulnerabilities: Claude Code skills for threat modeling, static scanning, triage and patching, plus an autonomous recon-to-patch pipeline (C/C++ memory bugs by default; needs Docker and gVisor). No longer maintained.
- [Jupyter Notebooks](https://hebbmind.com/skill/jupyter-notebook.md): [Skill] Creates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.
- [Life Science Research](https://hebbmind.com/skill/openai-skills-5.md): [Skill] OpenAI's official life-science skills: 49 skills query public databases such as UniProt, ClinVar, gnomAD and AlphaFold through Python scripts, with a router skill that breaks down questions, normalizes entities and compiles sourced evidence. Written mainly for Codex.
- [Codex PPT Skill](https://hebbmind.com/skill/codex-ppt-skill.md): [Skill] Turns articles, reports, papers or notes into a .pptx of full-slide images with speaker notes, in 12 styles such as lectures and thesis defenses; slide text is not editable. Needs Python 3; uses Codex's built-in image generation, or an OpenAI-compatible image API key in Claude Code.
- [n8n Skills](https://hebbmind.com/skill/n8n-skills.md): [Skill] 14 n8n workflow skills: expression syntax, MCP tool usage, node configuration, validation and troubleshooting, Code nodes, AI Agent workflows and self-hosted n8n deployment. Meant to be used with the n8n-mcp server.

Next page: https://hebbmind.com/tools.md?page=2&type=skill&profession=devops%2Calgorithm%2Csecurity%2Cresearch
