Tools

166 research skills maintained by K-Dense (formerly Claude Scientific Skills), spanning bioinformatics, cheminformatics, clinical research, materials and physics, including unified access to 78 public databases such as PubChem and UniProt. Works with Claude Code, Codex and Cursor.

Empirical social science skills from Stanford REAP and CoPaper.AI, bundling 77 in-house and third-party collections: topic selection, literature reviews, DID/RD/IV identification, regression tables in Python, Stata or R, robustness audits and paper writing. Stata flows need Stata installed.

About 40 research skills from Google DeepMind: search arXiv, PubMed and OpenAlex, query UniProt, PDB, ClinVar, ChEMBL and more, run AlphaGenome variant analysis and render structures in PyMOL. Requires uv; AlphaGenome needs an API key, and keys raise limits for OpenAlex, ClinVar and others.

From Harvard Medical School's Zitnik Lab: one MCP connecting 1,000+ scientific tools and databases for drugs and targets, genes and proteins, clinical trials, FDA data and PubMed, for biomedical and drug research. Runs with uv; some sources need API keys; medical conclusions need expert review.