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Etiquetas: scientific-computing +1
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6 elementos

Scientific Agent Skills
Skill166 research skills maintained by K-Dense (formerly Claude Scientific Skills), spanning bioinformatics, cheminformatics, clinical research, materials and physics, including unified access to 78 public databases such as PubChem and UniProt. Works with Claude Code, Codex and Cursor.
K-Dense-AI/scientific-agent-skills51.2k
Scanpy Single-Cell Analysis
SkillTeaches agents standard single-cell RNA-seq analysis with Scanpy: QC, normalization, PCA/UMAP, clustering, differential expression and plots, with ready-to-run pipeline scripts and guidance on converting Seurat and other R objects to h5ad. Needs Python 3.12+; by K-Dense.
K-Dense-AI/scientific-agent-skills51.2k
Statistical Analysis
SkillGuides agents to the right statistical method for research data: t-tests, ANOVA, chi-square, regression and Bayesian analysis, checking assumptions, computing effect sizes and power, and reporting results in APA format. Python-based (pingouin, statsmodels); by K-Dense.
K-Dense-AI/scientific-agent-skills51.2k
Jupyter Notebooks
SkillCreates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.
openai/plugins7.5k
Math Modeling Skill
SkillA three-stage workflow for math modeling contests like MCM/ICM and CUMCM: analysis, solving and plotting in Python or MATLAB, and a Word (optionally LaTeX) paper, with stage-check subagents and OpenAlex plus AnySearch literature search. Generated papers are for reference only.
XiaoMaColtAI/math-modeling-skill1.9k
Jupyter MCP Server
MCPConnects agents to live Jupyter notebooks: read, write, insert and execute cells and read multimodal outputs like charts, for interactive data analysis. Bring your own JupyterLab or JupyterHub; open source, maintained by Datalayer.
datalayer/jupyter-mcp-server1.3k