Tools

Creates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.

Build with OpenAI best practices inside Codex: call the OpenAI API, build and deploy agents with the Agents SDK, create ChatGPT apps and prepare submission materials, and create API keys directly. Maintained by OpenAI; Codex only.

Security scans for a whole repo or for changes like PRs and commits, with threat modeling, vulnerability triage, fixes and re-verification; reports export to JSON, SARIF and more. OpenAI's official Codex plugin; requires Codex Security access.

A more intuitive find-and-replace tool than sed: uses JavaScript/Python-style regex syntax, supports literal string mode and in-place file edits, which suits agents doing bulk text rewrites.

Converts and two-way syncs Jupyter notebooks with plain Python scripts or Markdown, so agents can edit research and teaching notebooks like ordinary text and diffs stay readable. Needs a local Python environment; install with pip.

Cleans a LaTeX project before arXiv submission: removes comments, auxiliary files and unused .tex files and images, and can compress images, so internal notes are not published with the source. From Google Research; installable with Homebrew on macOS.

Python library and CLI for extracting main web content: fetches pages, crawls via sitemaps and RSS feeds, strips headers, footers and other noise, and outputs TXT, Markdown, JSON, XML and more with metadata. Also processes downloaded HTML offline.

Static security analysis for CI/CD config: finds template injection, credential leaks, excessive permissions and more in GitHub Actions workflows, also covers Dependabot and pre-commit configs, and auto-fixes some findings.

14 n8n workflow skills: expression syntax, MCP tool usage, node configuration, validation and troubleshooting, Code nodes, AI Agent workflows and self-hosted n8n deployment. Meant to be used with the n8n-mcp server.

Google's official skills for building ADK agents: dev workflow, scaffolding, the ADK Python API, evaluation with LLM judges and adaptive rubrics, deployment to Agent Runtime, Cloud Run or GKE, publishing and observability. Works with agents-cli; local dev needs only an AI Studio key.

Docker's official CLI for building images, running and managing containers, viewing logs and pushing to registries, a foundational tool for agents setting up isolated environments. Needs a local or remote Docker Engine such as Docker Desktop.

Reference for pnpm 12: CLI, pnpm-workspace.yaml settings, monorepo workspaces, catalogs, overrides, patches, supply-chain settings such as build approval, task orchestration, CI setup and migration from npm, Yarn or older pnpm. Generated by Anthony Fu from the official docs.

Semi-automated research assistant for CS and AI researchers that links ideation, Zotero literature management, experiment analysis and reporting, paper writing and reviewer responses, and keeps project knowledge in Obsidian. Branches for Codex and other agents exist.

Semi-automated research workflow for computer science and AI researchers: ideation, Zotero literature management, experiment analysis and reports, paper writing and polishing, and rebuttals, with optional Obsidian knowledge base. 40+ skills; also installable as a Claude Code plugin.

250+ MCP tools for Ghidra: decompilation, cross-references, data-flow analysis, bulk renaming and commenting, P-code emulation and live debugging, with headless mode support. Requires Java 21 and Ghidra 12.1, and the plugin must be built and deployed first.

draw.io's official MCP: opens XML, CSV or Mermaid diagrams generated by the agent directly in the draw.io editor, good for flowcharts and architecture diagrams. A no-install remote version can also render diagrams inline in the chat.

Anthropic's official OS-level sandbox CLI: restricts file and network access for agents, MCP servers and any command without containers, using sandbox-exec on macOS and bubblewrap on Linux. Currently a research preview.

GitHub's official gh extension for writing Actions workflows in Markdown that AI agents execute, compiled into standard Actions. Choose engines like Copilot, Claude Code or Codex; runs in a read-only sandbox by default. Requires gh.

Interviews you to design an agentic control loop for your codebase in control-theory terms: a set point, a sensor built from existing tooling, a controller that picks small low-risk changes, and a coding agent that opens PRs. Builds each part to run locally before wiring a scheduled CI workflow.

Turns a repeatable agent task into a repo-local skill plus a GitHub Actions workflow that runs a coding agent (Claude Code, Codex, OpenCode or CodeLayer) on a schedule, with a prompt, memory file and one-open-PR bound. Reads the repo first, then walks you through cadence, scope and validation.

LM Studio's official CLI: list, load and unload local models, start and stop the local API server, and check status and logs; ls, ps and other commands support --json output for scripts and agents. Requires the LM Studio desktop app.

Detects shot changes in video and splits long footage into scenes, exporting cut lists and per-scene thumbnails, useful for shot analysis, organizing footage and finding edit points. Runs locally; needs Python 3.10+, plus FFmpeg or mkvmerge for splitting.

Classic CLI for reading and writing metadata in hundreds of file types including images, video, audio and PDF, covering EXIF, GPS, IPTC, XMP and camera makers' proprietary tags, with batch editing, stripping and conversion. Requires Perl.

WordPress's official CLI: install and update plugins and themes, manage posts and users, import and export content, run database search-replace and configure multisite from the terminal, without opening wp-admin. Requires PHP 7.2.24 or later.