Tools

166 research skills maintained by K-Dense (formerly Claude Scientific Skills), spanning bioinformatics, cheminformatics, clinical research, materials and physics, including unified access to 78 public databases such as PubChem and UniProt. Works with Claude Code, Codex and Cursor.

Reads the exact position of every character, line and table cell in digital PDFs: the CLI exports layout-preserving text or CSV/JSON details, and the Python API extracts tables and form fields, ideal for invoices, statements and reports. Runs locally with Python; scans need OCR first.

Creates, edits and validates reproducible Python and SQL Jupyter notebooks: organizes cells as reports or tutorials, checks conclusions against actual output and reruns top to bottom before handoff. Maintained by OpenAI in the Data Analytics plugin of openai/plugins.

Create, read and modify xlsx workbooks without Microsoft Excel installed: formulas, formatting and conditional formatting, charts, pivot tables and tables. Runs locally over stdio or as a remote HTTP service.

Knownsec's open-source Python-use agent: describe a task in plain language and it writes and runs Python on your machine, e.g. tidying Excel files, summarizing attendance or screening resumes. Needs Python 3.11+ and a model API key such as DeepSeek; code runs locally, so back up important files.

Connects agents to live Jupyter notebooks: read, write, insert and execute cells and read multimodal outputs like charts, for interactive data analysis. Bring your own JupyterLab or JupyterHub; open source, maintained by Datalayer.

Lets agents read and write Google Sheets: list and search spreadsheets, read and batch-update cells, insert rows and columns, create and share sheets and build charts, with the option to enable only some tools to save context. Needs a Google Cloud service account or OAuth credentials.