Tools

Publication-quality matplotlib plotting skill from a Yale PhD student: bar charts, trends, heatmaps and multi-panel figures with consistent fonts, colors and export settings, plus real plotting scripts from papers published in venues like Nature Machine Intelligence. Needs Python.

Manages multiple Claude Code, Codex, Gemini and Aider sessions in parallel from one terminal: each task gets its own git worktree, can run in the background, and changes are reviewed before merging. Requires tmux and gh.

Free remote MCP service that turns any GitHub repo or GitHub Pages site into a docs endpoint, so agents can read up-to-date docs and search code on demand and hallucinate fewer APIs. No sign-up or install; self-hosting is also possible.

Spec-driven project management for software: guides brainstorming into a PRD, breaks it into epics and dependent tasks synced as GitHub Issues, answers standup, next-step and blocker questions, and can dispatch several agents to code in parallel. Needs Git, an authenticated gh CLI and a GitHub repo.

HTTP client CLI that reimplements HTTPie's syntax in Rust with a focus on performance; key-value pairs on the command line are sent as JSON by default, making it quick to debug REST APIs.

Offline speech toolkit for Apple Silicon Macs: CLI text-to-speech (including Chinese and voice cloning) and speech-to-text, for voicing lessons and explainer videos or transcribing lectures and interviews, with data staying local. Needs an M-series Mac and Python 3.10+; MP3 export needs ffmpeg.

Query, modify and convert JSON, YAML, TOML, XML, CSV, HCL, INI and more with one selector syntax, editing config files in place or converting between formats, handy for agents handling structured data in scripts. A single dependency-free binary that works much like jq or yq.

Query cloud resources and SaaS APIs live with SQL: plugins map AWS, Azure, GCP, GitHub, Kubernetes and other services to tables you can select from directly, no ETL needed. A single binary with Postgres built in.

Moonshot AI's official terminal coding agent: reads and edits code, runs commands, searches files and fetches web pages, with video input, MCP, plugins, subagents and hooks, plus Zed and JetBrains integration via ACP. Needs a Kimi sign-in or Moonshot API key. Replaces the archived Kimi CLI.

Diffusion model inference in pure C/C++: one sd-cli command runs SD, FLUX, Qwen Image, Wan and more locally to create or edit images and short videos, with Metal acceleration on Mac. No cloud needed; bring your own model weights and use a release binary or build from source.

Plugin marketplace from security firm Trail of Bits with 40+ plugins for code auditing, CodeQL/Semgrep static analysis, variant analysis, supply-chain risk, smart contract security and reverse engineering. Codex can load it directly too.

Trail of Bits skill that audits npm, PyPI and Go supply-chain risk: known advisories across direct deps and the whole lockfile tree, deprecated or archived upstreams, npm publisher concentration and install-time scripts. Needs uv; a logged-in gh is recommended.

Trail of Bits static analysis skills: CodeQL for interprocedural taint tracking and data-flow analysis, Semgrep for rule-based scanning, plus parsing and deduplicating SARIF results. Requires CodeQL or Semgrep installed locally.

From Trail of Bits: starts from one confirmed vulnerability, distills its root cause, then writes and progressively generalizes CodeQL/Semgrep queries to find similar variants across the codebase and report them by severity.

Turns Peng Sida's public research-writing notes into a skill: revises abstracts, introductions, methods and experiments of ML/CV/NLP papers from a reviewer's view, checks that each claim has experimental evidence, and runs a pre-submission self-check. Pure methodology, no API key.

Trail of Bits skill that audits GitHub Actions workflows wired to AI coding agents (Claude Code Action, Codex, Gemini CLI and others) for prompt injection, env-variable relays, dangerous sandbox settings, wildcard allowlists and other privilege risks.

From Trail of Bits: reviews PRs, commits or diffs from a security angle, tracing history with git blame, estimating blast radius by caller count and checking test coverage gaps, then writes a Markdown review report.

Scrapes web pages into Markdown or structured data, with full-site crawling, sitemaps, web search and interaction with dynamic pages. Maintained by Firecrawl; the cloud needs an API key (self-hosting is possible), and the keyless hosted endpoint only offers scrape, search and parse.

Anthropic's reference implementation for finding and fixing vulnerabilities: Claude Code skills for threat modeling, static scanning, triage and patching, plus an autonomous recon-to-patch pipeline (C/C++ memory bugs by default; needs Docker and gVisor). No longer maintained.

Builds, refactors and debugs ChatGPT apps with the OpenAI Apps SDK: plans tools, scaffolds the MCP server and UI widgets, and checks the work against official docs. Maintained by OpenAI; formerly chatgpt-apps in openai/skills.

OpenAI's official Codex plugin for building frontend apps and generating visual assets, testing and debugging in a browser, plus best-practice skills for React, shadcn/ui, Stripe payments and Supabase databases. Codex only.

OpenAI's official Codex plugin marketplace (openai-curated) with 60+ plugins such as Figma, Notion, GitHub, Stripe and Vercel, each bundling skills, MCP servers and app connections into one install.

Build with OpenAI best practices inside Codex: call the OpenAI API, build and deploy agents with the Agents SDK, create ChatGPT apps and prepare submission materials, and create API keys directly. Maintained by OpenAI; Codex only.

Linear's official plugin in OpenAI's Codex marketplace: search, create and update Linear issues, projects and initiatives from Codex, and draft PRDs, status updates and customer request summaries. Codex only; needs a Linear account and authorization.